WormBase Tree Display for Gene: WBGene00020104

WBGene00020104 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 1
    Name: Sequence_name: R148.5
      Molecular_name: R148.5a
        R148.5a.1
        CE31583
        R148.5b
        CE32711
        R148.5a.2
        R148.5b.1
      Other_name: CELE_R148.5 Accession_evidence: NDB BX284603
      Public_name: R148.5
    DB_info: Database: AceView gene 3E259
        WormQTL gene WBGene00020104
        WormFlux gene WBGene00020104
        NDB locus_tag CELE_R148.5
        Panther gene CAEEL|WormBase=WBGene00020104|UniProtKB=H2KZA6
          family PTHR21219
        NCBI gene 175422
        RefSeq protein NM_001384050.2
            NM_181961.3
        TREEFAM TREEFAM_ID TF319512
        TrEMBL UniProtAcc Q8ITY9
            H2KZA6
        UniProt_GCRP UniProtAcc H2KZA6
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (120)
    RNASeq_FPKM (74)
    Ortholog (31)
    Structured_description: Automated_description: Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; anterior hypodermis; and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by fifteen chemicals including 1-methylnicotinamide; methylmercuric chloride; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: PTB/PI domain and Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R148.5a
      R148.5b
    Corresponding_CDS_history: R148.5:wp82
    Corresponding_transcript: R148.5a.1
      R148.5a.2
      R148.5b.1
    Other_sequence (41)
    Associated_feature (11)
  Experimental_info: RNAi_result: WBRNAi00051969 Inferred_automatically: RNAi_primary
      WBRNAi00006518 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021381
      Expr1038743
      Expr1155613
      Expr2005653
      Expr2023869
    Microarray_results (30)
    Expression_cluster: WBPaper00027339:daf-12(rh273)_upregulated
      WBPaper00032031:DConiospora_upregulated_OligoArray_24h
      WBPaper00033065:clk-1(qm30)_upregulated
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:hypodermis_embryo_enriched
      WBPaper00037950:hypodermis_embryo_SelectivelyEnriched
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038168:lin-35_downregulated
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00044260:1-methylnicotinamide_downregulated
      WBPaper00044260:nicotic-acid_downregulated
      WBPaper00044316:CH3HgCl_7.5uM_downregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Oogenic
      WBPaper00045729:gld-2(RNAi)_downregulated
      WBPaper00046121:ecdoderm_unique
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00048988:neuron_expressed
      WBPaper00049217:DAF-16_upregulated
      WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
      WBPaper00049920:Glucose-Diet_upregulated_N2
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:NMDA-neuron_enriched
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00051404:alg-2(ok304)_downregulated
      WBPaper00051558:aging_regulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:PGCs_depleted_NuGen
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00053599:female_vs_male_upregulated
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00054410:set-9(rw5)_downregulated
      WBPaper00054410:set-26(tm2467)_downregulated
      WBPaper00055060:flr-1(RNAi)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00055482:Tunicamycin_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056826:SGP_biased
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_downregulated
      WBPaper00057162:meg-3_meg-4_downregulated_sRNA
      WBPaper00057288:Cold_upregulated_transcript
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058958:100mGy-irradiation-72h_upregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060084:cco-1(RNAi)_downregulated_N2
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:G2_and_W_blasts
      WBPaper00061340:hyp4_hyp5_hyp6
      WBPaper00061340:hyp7_AB_lineage
      WBPaper00061340:hyp7_C_lineage
      WBPaper00061340:P_cell
      WBPaper00061340:T
      WBPaper00061340:Tail_hypodermis
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061466:nath-10(icb102)_downregulated
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061479:HDA-1_interacting_protein
      WBPaper00061527:mlt-9_22518-F33D4.6_14044
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062237:dnj-21(RNAi)_upregulated_protein
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062345:bortezomib_4h_downregulated_N2
      WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062590:Aging_downregulated_neuron
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
      WBPaper00064716:paraquat_downregulated
      WBPaper00064727:daf-2(e1370)_upregulated
      WBPaper00064735:bet-1(uth41)_vs_N2_upregulated
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00065032:PAO1_vs_Delt.Pf4-infection_downregulated
      WBPaper00065373:Cisplatin_upregulated_WT
      WBPaper00065841:5_0
      WBPaper00065841:5_1
      WBPaper00065841:21_0
      WBPaper00065841:30_2
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      cgc4386_cluster_6_1
      cgc4489_group_8
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031003:hlh_1_enriched
      WBPaper00034739:N2lessDR1350
      WBPaper00036123:Atrazine_regulated
      WBPaper00039866:ClassComp_daf-19_upregulated
      WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00041174:environmental
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00042331:a-SWCNTs_downregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
      [cgc6390]:Cluster_B
    Interaction: WBInteraction000031841
      WBInteraction000178104
      WBInteraction000212796
      WBInteraction000229128
      WBInteraction000237445
      WBInteraction000240915
      WBInteraction000257256
      WBInteraction000258435
      WBInteraction000266392
      WBInteraction000267518
      WBInteraction000269438
      WBInteraction000269696
      WBInteraction000274962
      WBInteraction000278155
      WBInteraction000288688
      WBInteraction000296723
      WBInteraction000297039
      WBInteraction000299131
      WBInteraction000302212
      WBInteraction000306708
      WBInteraction000312055
      WBInteraction000316989
      WBInteraction000319843
      WBInteraction000326075
      WBInteraction000331880
      WBInteraction000335507
      WBInteraction000336715
      WBInteraction000344062
      WBInteraction000347624
      WBInteraction000347974
      WBInteraction000350548
      WBInteraction000354303
      WBInteraction000358677
      WBInteraction000365065
      WBInteraction000367325
      WBInteraction000370570
      WBInteraction000371079
      WBInteraction000374110
      WBInteraction000375951
      WBInteraction000389872
      WBInteraction000392550
      WBInteraction000400657
      WBInteraction000401404
      WBInteraction000401838
      WBInteraction000402868
      WBInteraction000412922
      WBInteraction000413107
      WBInteraction000415269
      WBInteraction000415422
      WBInteraction000416552
      WBInteraction000419932
      WBInteraction000426111
      WBInteraction000429601
      WBInteraction000432833
      WBInteraction000434296
      WBInteraction000437890
      WBInteraction000438830
      WBInteraction000448213
      WBInteraction000449978
      WBInteraction000458580
      WBInteraction000516080
      WBInteraction000552778
      WBInteraction000574203
      WBInteraction000575454
  Map_info: Positive: Positive_clone: R148 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -7.45631
  Method: Gene