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WormBase Tree Display for Gene: WBGene00011414

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Name Class

WBGene00011414SMapS_parentSequenceT04A8
Identity (6)
Gene_infoBiotypeSO:0001217
Allele (20)
StrainWBStrain00002160
RNASeq_FPKM (74)
OrthologWBGene00037502Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Structured_descriptionAutomated_descriptionEnriched in intestine; neurons; and in male based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including Ethanol; allantoin; and Sirolimus based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST04A8.13
Corresponding_CDS_historyT04A8.13:wp194
Corresponding_transcriptT04A8.13.1
Other_sequence (13)
Associated_featureWBsf658855
WBsf992197
WBsf1014791
WBsf1014792
WBsf224786
Experimental_infoRNAi_resultWBRNAi00062753Inferred_automaticallyRNAi_primary
WBRNAi00052332Inferred_automaticallyRNAi_primary
WBRNAi00005050Inferred_automaticallyRNAi_primary
WBRNAi00001092Inferred_automaticallyRNAi_primary
WBRNAi00062754Inferred_automaticallyRNAi_primary
WBRNAi00111242Inferred_automaticallyRNAi_primary
WBRNAi00018108Inferred_automaticallyRNAi_primary
WBRNAi00018109Inferred_automaticallyRNAi_primary
Expr_patternChronogram384
Expr1026622
Expr1155967
Expr2005796
Expr2024013
Drives_constructWBCnstr00002920
WBCnstr00030676
Construct_productWBCnstr00030676
Microarray_resultsSMD_T04A8.12
SMD_T04A8.13
GPL14144_T04A8.13_557-616_0.948_1_A
GPL19516_CGZ0033031
GPL21109_T04A8.13
GPL9450_T04A8.13
cea2.3.22594
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
WBPaper00037682:sma-2_sma-4_upregulated
WBPaper00037950:A-class-motor-neurons_embryo_enriched
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_embryo_enriched
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00041954:ethanol_upregulated
WBPaper00042194:nhr-114(RNAi)_upregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044616:alg-3-4_upregulated_gene
WBPaper00044736:flat_dev_expression
WBPaper00045521:Spermatogenic
WBPaper00046805:P-granule-RNAi_upregulated_Set1
WBPaper00049498:npr-1(ur89)_regulated_2
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
WBPaper00050231:male_enriched
WBPaper00050743:elli-1(sam-3)_upregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot267)_downregulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053599:female_vs_male_downregulated
WBPaper00053599:mitosis_vs_meiosis_upregulated
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055648:sperm_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056161:male_enriched_siRNA
WBPaper00056167:Cry5B_downregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_adult
WBPaper00056169:rrf-3(pk1426)_upregulated_L4
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061478:pie-1(ne4433)_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062193:daf-16(RNAi)_upregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064502:nhr-23(kry61);spe-44(fx110)_downregulated
WBPaper00064502:spe-44(fx110)_downregulated
WBPaper00064505:tamoxifen_downregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064728:cpl-1(W32AY35A)_upregulated
WBPaper00065029:cadmium_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065158:AFD_enriched
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
cgc4489_group_15
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00040858:eQTL_regulated_juvenile
[cgc6390]:mixed_oogenesis-somatic
[cgc6390]:spermatogenesis-enriched
InteractionWBInteraction000217657
WBInteraction000232740
WBInteraction000246538
WBInteraction000250389
WBInteraction000252543
WBInteraction000266267
WBInteraction000282031
WBInteraction000301037
WBInteraction000306195
WBInteraction000320880
WBInteraction000327222
WBInteraction000331947
WBInteraction000332712
WBInteraction000337942
WBInteraction000341636
WBInteraction000350966
WBInteraction000350999
WBInteraction000357510
WBInteraction000369363
WBInteraction000380814
WBInteraction000382449
WBInteraction000393339
WBInteraction000393395
WBInteraction000395406
WBInteraction000397199
WBInteraction000398122
WBInteraction000407331
WBInteraction000410119
WBInteraction000419896
WBInteraction000445220
WBInteraction000446469
WBInteraction000447076
Map_infoPositivePositive_cloneT04A8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-2.8036
ReferenceWBPaper00038491
WBPaper00055090
MethodGene