WormBase Tree Display for Gene: WBGene00011032

WBGene00011032 SMap: S_parent: Sequence: R05D11
  Identity: Version: 2
    Name: CGC_name: ddx-52 Person_evidence: WBPerson124
            WBPerson31189
      Sequence_name: R05D11.4
      Molecular_name: R05D11.4
        R05D11.4.1
        CE06239
      Other_name: CELE_R05D11.4 Accession_evidence: NDB BX284601
      Public_name: ddx-52
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 11 Oct 2017 16:33:09 WBPerson1983 Name_change: CGC_name: ddx-52
    Status: Live
  Gene_info (11)
  Molecular_info: Corresponding_CDS: R05D11.4
    Corresponding_transcript: R05D11.4.1
    Other_sequence (40)
    Associated_feature: WBsf656643
      WBsf218170
      WBsf218171
      WBsf218172
      WBsf218173
  Experimental_info: RNAi_result: WBRNAi00008048 Inferred_automatically: RNAi_primary
      WBRNAi00004044 Inferred_automatically: RNAi_primary
      WBRNAi00075480 Inferred_automatically: RNAi_primary
      WBRNAi00094890 Inferred_automatically: RNAi_primary
      WBRNAi00051268 Inferred_automatically: RNAi_primary
      WBRNAi00102178 Inferred_automatically: RNAi_primary
      WBRNAi00116973 Inferred_automatically: RNAi_primary
      WBRNAi00034596 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr15789
      Expr1020557
      Expr1034836
      Expr1154970
      Expr2005386
      Expr2023606
    Drives_construct: WBCnstr00030980
      WBCnstr00042522
    Construct_product: WBCnstr00030980
      WBCnstr00042522
    Microarray_results (17)
    Expression_cluster: WBPaper00028451:Low_abundance_spermatogenesis_enriched
      WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00035211:age-1_vs_age-1_downregulated
      WBPaper00035211:age-1_vs_N2_downregulated
      WBPaper00037950:AVA-neuron_embryo_enriched
      WBPaper00037950:bodywall-muscle_larva_enriched
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045774:clk-1_downregulated
      WBPaper00047132:skn-1(RNAi)_downregulated_glp-1(ts)-dependent
      WBPaper00048988:neuron_expressed
      WBPaper00049290:rsks-1(sv31)_downregulated
      WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051245:intestine_nucleus_expressed
      WBPaper00051245:nucleus_specific
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00059334:SACY-1_interacting
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061340:M4_parent
      WBPaper00061340:Neuroblast_I6_M5
      WBPaper00061340:Parent_of_g1P_I3
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
      WBPaper00061527:lpd-2-EEED8.16
      WBPaper00062056:lin-37(n758)_upregulated
      WBPaper00062193:hsf-1(RNAi)_downregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064494:postdauer_downregulated_AWA
      WBPaper00064716:paraquat_upregulated
      WBPaper00064939:vit-5(RNAi)_upregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065258:anchor-cell_depleted
      WBPaper00065373:Cisplatin_downregulated_WT
      WBPaper00065373:sek-1(km4)_downregulated_cisplatin
      WBPaper00065945:epidermis-rpoa-2(-)_downregulated_protein
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_4
      WBPaper00025032:cluster_127
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00034739:N2moreDR1350
      WBPaper00035905:FBF-1_Associated
      WBPaper00036130:mir-243_down_regulated
      WBPaper00041002:HF_11d_2.0mM_Down
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
      [cgc6390]:intrinsic
    SAGE_tag (16)
    Interaction: WBInteraction000042904
      WBInteraction000042905
      WBInteraction000042906
      WBInteraction000111840
      WBInteraction000119696
      WBInteraction000120360
      WBInteraction000121131
      WBInteraction000121967
      WBInteraction000124341
      WBInteraction000124472
      WBInteraction000124666
      WBInteraction000124755
      WBInteraction000124945
      WBInteraction000137346
      WBInteraction000137365
      WBInteraction000138590
      WBInteraction000139150
      WBInteraction000139163
      WBInteraction000140304
      WBInteraction000140662
      WBInteraction000141022
      WBInteraction000141093
      WBInteraction000141148
      WBInteraction000141703
      WBInteraction000141732
      WBInteraction000142082
      WBInteraction000142727
      WBInteraction000142751
      WBInteraction000143024
      WBInteraction000143705
      WBInteraction000143775
      WBInteraction000144765
      WBInteraction000146464
      WBInteraction000146777
      WBInteraction000147459
      WBInteraction000147587
      WBInteraction000148202
      WBInteraction000148546
      WBInteraction000148611
      WBInteraction000149923
      WBInteraction000150027
      WBInteraction000151976
      WBInteraction000152005
      WBInteraction000153299
      WBInteraction000160994
      WBInteraction000163345
      WBInteraction000164752
      WBInteraction000164998
      WBInteraction000165388
      WBInteraction000168151
      WBInteraction000168301
      WBInteraction000168430
      WBInteraction000170288
      WBInteraction000171254
      WBInteraction000172111
      WBInteraction000172319
      WBInteraction000175000
      WBInteraction000177496
      WBInteraction000182928
      WBInteraction000183803
      WBInteraction000183915
      WBInteraction000186211
      WBInteraction000186753
      WBInteraction000187245
      WBInteraction000187481
      WBInteraction000190219
      WBInteraction000191185
      WBInteraction000193040
      WBInteraction000195216
      WBInteraction000196012
      WBInteraction000196262
      WBInteraction000197982
      WBInteraction000201415
      WBInteraction000201539
      WBInteraction000203634
      WBInteraction000211802
      WBInteraction000213461
      WBInteraction000216593
      WBInteraction000220739
      WBInteraction000221978
      WBInteraction000223130
      WBInteraction000227873
      WBInteraction000232455
      WBInteraction000235186
      WBInteraction000240768
      WBInteraction000242410
      WBInteraction000243245
      WBInteraction000246617
      WBInteraction000247630
      WBInteraction000249253
      WBInteraction000254234
      WBInteraction000256576
      WBInteraction000256720
      WBInteraction000262061
      WBInteraction000262593
      WBInteraction000263982
      WBInteraction000264585
      WBInteraction000271733
      WBInteraction000272147
      WBInteraction000276255
      WBInteraction000276648
      WBInteraction000277391
      WBInteraction000279484
      WBInteraction000279727
      WBInteraction000281399
      WBInteraction000284350
      WBInteraction000291275
      WBInteraction000292348
      WBInteraction000293067
      WBInteraction000296673
      WBInteraction000299196
      WBInteraction000299398
      WBInteraction000302911
      WBInteraction000302917
      WBInteraction000306849
      WBInteraction000306850
      WBInteraction000309491
      WBInteraction000311445
      WBInteraction000315299
      WBInteraction000315634
      WBInteraction000318469
      WBInteraction000319787
      WBInteraction000327377
      WBInteraction000327549
      WBInteraction000336657
      WBInteraction000353649
      WBInteraction000360607
      WBInteraction000368964
      WBInteraction000374998
      WBInteraction000375995
      WBInteraction000384972
      WBInteraction000390037
      WBInteraction000390352
      WBInteraction000398136
      WBInteraction000399565
      WBInteraction000400342
      WBInteraction000403143
      WBInteraction000413537
      WBInteraction000423993
      WBInteraction000427222
      WBInteraction000428230
      WBInteraction000429723
      WBInteraction000431530
      WBInteraction000431580
      WBInteraction000433075
      WBInteraction000434373
      WBInteraction000438604
      WBInteraction000441110
      WBInteraction000443409
      WBInteraction000444109
      WBInteraction000449899
      WBInteraction000452261
      WBInteraction000454107
      WBInteraction000455307
      WBInteraction000455396
      WBInteraction000459210
      WBInteraction000463242
      WBInteraction000463262
      WBInteraction000464574
      WBInteraction000465624
      WBInteraction000466047
      WBInteraction000466177
      WBInteraction000466396
      WBInteraction000466727
      WBInteraction000466822
      WBInteraction000467354
      WBInteraction000469169
      WBInteraction000469298
      WBInteraction000470714
      WBInteraction000471482
      WBInteraction000471882
      WBInteraction000472345
      WBInteraction000472381
      WBInteraction000473258
      WBInteraction000473285
      WBInteraction000473634
      WBInteraction000474294
      WBInteraction000474736
      WBInteraction000475073
      WBInteraction000475127
      WBInteraction000475235
      WBInteraction000521089
      WBInteraction000548187
      WBInteraction000553782
      WBInteraction000566963
      WBInteraction000582127
      WBInteraction000585758
      WBInteraction000586730
  Map_info: Map: I Position: 2.98792
    Positive: Positive_clone: R05D11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00036306
    WBPaper00038491
    WBPaper00055090
    WBPaper00057375
    WBPaper00060602
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene