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WormBase Tree Display for Gene: WBGene00009208

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Name Class

WBGene00009208SMapS_parentSequenceF28C6
IdentityVersion2
NameCGC_namecepr-104.3Person_evidenceWBPerson10503
Sequence_nameF28C6.9
Molecular_nameF28C6.9
F28C6.9.1
CE53799
Other_nameCELE_F28C6.9Accession_evidenceNDBBX284602
Public_namecepr-104.3
DB_infoDatabaseAceViewgene2I900
WormQTLgeneWBGene00009208
WormFluxgeneWBGene00009208
NDBlocus_tagCELE_F28C6.9
PanthergeneCAEEL|WormBase=WBGene00009208|UniProtKB=B7WN93
familyPTHR13371
NCBIgene185049
RefSeqproteinNM_001377830.2
TrEMBLUniProtAccB7WN93
UniProt_GCRPUniProtAccB7WN93
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
202 May 2024 17:38:16WBPerson51134Name_changeCGC_namecepr-104.3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcepr
Allele (25)
RNASeq_FPKM (74)
Ortholog (27)
ParalogWBGene00008039Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011523Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015517Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in RIPL; neurons; and in male based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including qui-1; etr-1; and csr-1 based on RNA-seq and microarray studies. Is affected by stearic acid; sucrose; and Colistin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Centrosomal protein CEP104, N-terminal and Centrosomal protein CEP104, N-terminal domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSF28C6.9
Corresponding_CDS_historyF28C6.9:wp197
F28C6.9a:wp274
F28C6.9b:wp274
F28C6.9b:wp291
Corresponding_transcriptF28C6.9.1
Associated_featureWBsf650345
WBsf223522
Experimental_infoRNAi_resultWBRNAi00014040Inferred_automaticallyRNAi_primary
WBRNAi00027308Inferred_automaticallyRNAi_primary
WBRNAi00045823Inferred_automaticallyRNAi_primary
WBRNAi00025294Inferred_automaticallyRNAi_primary
WBRNAi00025295Inferred_automaticallyRNAi_primary
WBRNAi00112643Inferred_automaticallyRNAi_primary
WBRNAi00014044Inferred_automaticallyRNAi_primary
Expr_patternExpr1025378
Expr1149730
Expr2003103
Expr2021317
Drives_constructWBCnstr00032370
Construct_productWBCnstr00032370
Microarray_results (18)
Expression_clusterWBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00048988:neuron_expressed
WBPaper00049001:EVN_enriched
WBPaper00050231:male_enriched
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059253:sucrose_stearic-acid_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060634:fhod-1(tm2363)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061340:IL2
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:acy-2-F35C5.11
WBPaper00061651:IL2_DV_enriched
WBPaper00061651:IL2_LR_enriched
WBPaper00061753:csr-1(tor159)_downregulated_20C
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062520:qui-1(db104)_downregulated
WBPaper00065841:20_1
WBPaper00065841:25_0
WBPaper00065841:25_1
WBPaper00066485:ogt-1_upregulated_neuron
cgc4489_group_18
cgc4489_group_22
WBPaper00026629:L4_male_enriched
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00034739:N2moreDR1350
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045673:colistin_upregulated
[cgc6390]:male_soma-enriched
InteractionWBInteraction000111928
WBInteraction000134358
WBInteraction000138403
WBInteraction000142336
WBInteraction000142839
WBInteraction000157124
WBInteraction000181783
WBInteraction000189814
WBInteraction000205865
WBInteraction000206565
WBInteraction000207791
WBInteraction000209132
WBInteraction000212530
WBInteraction000235451
WBInteraction000237960
WBInteraction000259852
WBInteraction000262722
WBInteraction000276978
WBInteraction000280497
WBInteraction000292056
WBInteraction000292077
WBInteraction000293864
WBInteraction000305971
WBInteraction000316250
WBInteraction000318299
WBInteraction000344164
WBInteraction000360162
WBInteraction000367846
WBInteraction000370219
WBInteraction000377684
WBInteraction000392914
WBInteraction000446794
Map_infoPositivePositive_cloneF28C6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII0.826691
MethodGene