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WormBase Tree Display for Gene: WBGene00004244

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Name Class

WBGene00004244SMapS_parentSequenceC30G12
IdentityVersion2
NameCGC_namepuf-8Person_evidenceWBPerson320
Sequence_nameC30G12.7
Molecular_nameC30G12.7
C30G12.7.1
CE37486
Other_nameteg-2Person_evidenceWBPerson555
CELE_C30G12.7Accession_evidenceNDBBX284602
Public_namepuf-8
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:34WBPerson1971EventImportedInitial conversion from geneace
214 Aug 2012 14:38:21WBPerson2970EventAcquires_mergeWBGene00006564
Name_changeOther_nameteg-2
Acquires_mergeWBGene00006564
StatusLive
Gene_info (10)
Disease_infoExperimental_modelDOID:9970Homo sapiensPaper_evidenceWBPaper00061889
Curator_confirmedWBPerson324
Date_last_updated28 Jun 2022 00:00:00
Potential_modelDOID:0111743Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:14957)
Models_disease_in_annotationWBDOannot00001263
Molecular_infoCorresponding_CDSC30G12.7
Corresponding_CDS_historyC30G12.7:wp130
Corresponding_transcriptC30G12.7.1
Other_sequenceCR01371
CRC02691_1
CJC01330_1
Associated_featureWBsf019217
WBsf019218
WBsf223321
Gene_product_bindsWBsf899537
WBsf899538
WBsf899539
WBsf899540
Experimental_infoRNAi_result (24)
Expr_pattern (11)
Drives_construct (12)
Construct_productWBCnstr00005726
WBCnstr00005727
WBCnstr00017042
WBCnstr00017521
WBCnstr00017549
WBCnstr00017550
WBCnstr00017551
WBCnstr00017552
WBCnstr00035610
Regulate_expr_clusterWBPaper00045618:puf-8_downregulated
WBPaper00045618:puf-8_upregulated
Microarray_results (19)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00035269:cde-1_regulated
WBPaper00037950:germline-precursors_embryo_enriched
WBPaper00037950:germline-precursors_embryo_SelectivelyEnriched
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00042194:nhr-114(RNAi)_upregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00045050:drh-3 (ne4253)_downregulated
WBPaper00045521:Gender_Neutral
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00045774:clk-1_upregulated
WBPaper00048611:MnCl2_downregulated
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_8
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00049954:BPS_downregulated
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050234:lin-28(RNAi)_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:seam_enriched
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053302:stavudine_72h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055648:germline_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056165:MINA-1_interacting_mRNA
WBPaper00056284:ints-5(RNAi)_downregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:hmc_biased
WBPaper00057006:DietaryRestriction_downregulated
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059027:neuron-synapses_enriched
WBPaper00059254:CSR-1_interacting
WBPaper00059254:PRG-1_interacting
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059598:HeatShock_downregulated
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061340:Germline
WBPaper00061527:puf-3-oma-2_18268
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064315:mes-4(bn73)_downregulated_EGCs
WBPaper00064716:paraquat_upregulated
WBPaper00064769:him-17(me24)_downregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065258:anchor-cell_depleted
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
WBPaper00025032:cluster_125
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00032165:A_to_C_transit_decreased
WBPaper00032165:differentially_expressed_with_age_medoid_5
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035873:dpy-10_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_B
WBPaper00036429:glp-1(oz112)_upregulated
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00040876:mir-35_upregulated
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00042128:gei-8(ok1671)_downregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00048624:hlh-25(ok1710)_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00051387:Triclosan_downregulated
WBPaper00056330:mrps-5(RNAi)_downregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:cluster_6
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(PC32)
[cgc5767]:expression_class_SM
[cgc5767]:expression_class_SMD
[cgc6390]:oogenesis-enriched
Interaction (43)
WBProcessWBbiopr:00000069
Map_infoMapIIPosition0.500136Error0.000128
PositivePositive_cloneC30G12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4171
4615
5564
3796
3826
Pseudo_map_position
Reference (78)
Remarksequence connection from [Bernstein M, Wickens MP]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene