WormBase Tree Display for Gene: WBGene00010055
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WBGene00010055 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | dhgd-1 | Person_evidence | WBPerson1997 | |||||
WBPerson41219 | |||||||||
Sequence_name | F54D5.12 | ||||||||
Molecular_name | F54D5.12 | ||||||||
F54D5.12.1 | |||||||||
CE26814 | |||||||||
F54D5.12.2 | |||||||||
Other_name | CELE_F54D5.12 | Accession_evidence | NDB | BX284602 | |||||
Public_name | dhgd-1 | ||||||||
DB_info | Database | AceView | gene | 2L830 | |||||
WormQTL | gene | WBGene00010055 | |||||||
WormFlux | gene | WBGene00010055 | |||||||
NDB | locus_tag | CELE_F54D5.12 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010055|UniProtKB=G5EE46 | |||||||
family | PTHR43716 | ||||||||
NCBI | gene | 174764 | |||||||
RefSeq | protein | NM_064064.9 | |||||||
KEGG | KEGG_id | 1.1.99.39 | |||||||
NemaPath | KEGG_id | 1.1.99.39 | |||||||
TREEFAM | TREEFAM_ID | TF323342 | |||||||
TrEMBL | UniProtAcc | G5EE46 | |||||||
UniProt_GCRP | UniProtAcc | G5EE46 | |||||||
OMIM | gene | 609186 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | dhgd-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dhgd | ||||||||
Allele (211) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00015395 | ||||||||
00015396 | |||||||||
00117545 | |||||||||
00117546 | |||||||||
Contained_in_operon | CEOP2556 | ||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00000081 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00009329 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00009334 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable catalytic activity and flavin adenine dinucleotide binding activity. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in D-2-hydroxyglutaric aciduria 1. Is an ortholog of human D2HGDH (D-2-hydroxyglutarate dehydrogenase). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0111351 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:28358) | ||||
Molecular_info | Corresponding_CDS | F54D5.12 | |||||||
Corresponding_CDS_history | F54D5.12:wp42 | ||||||||
Corresponding_transcript | F54D5.12.1 | ||||||||
F54D5.12.2 | |||||||||
Other_sequence (33) | |||||||||
Associated_feature (11) | |||||||||
Experimental_info | RNAi_result | WBRNAi00094880 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048309 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021225 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015616 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032788 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020051 | ||||||||
Expr1034386 | |||||||||
Expr1152110 | |||||||||
Expr2004148 | |||||||||
Expr2022372 | |||||||||
Regulate_expr_cluster (2) | |||||||||
Microarray_results (21) | |||||||||
Expression_cluster (175) | |||||||||
Interaction (45) | |||||||||
Map_info | Map | II | Position | 3.74919 | |||||
Positive | Positive_clone | F54D5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00060111 | |||||||||
WBPaper00063953 | |||||||||
WBPaper00065272 | |||||||||
Remark | [220202 skd] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (3.74151) | ||||||||
Method | Gene |