WormBase Tree Display for Gene: WBGene00019285
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WBGene00019285 | SMap | S_parent | Sequence | K01A2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | cbn-1 | |||||||
Sequence_name | K01A2.11 | ||||||||
Molecular_name | K01A2.11a | ||||||||
K01A2.11a.1 | |||||||||
CE35985 | |||||||||
K01A2.11b | |||||||||
CE19521 | |||||||||
K01A2.11d | |||||||||
CE38387 | |||||||||
K01A2.11b.1 | |||||||||
K01A2.11c | |||||||||
K01A2.11d.1 | |||||||||
Other_name | CELE_K01A2.11 | Accession_evidence | NDB | BX284602 | |||||
Public_name | cbn-1 | ||||||||
DB_info | Database | AceView | gene | 2A620 | |||||
WormQTL | gene | WBGene00019285 | |||||||
WormFlux | gene | WBGene00019285 | |||||||
NDB | locus_tag | CELE_K01A2.11 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019285|UniProtKB=H2KY97 | |||||||
family | PTHR23064 | ||||||||
NCBI | gene | 173423 | |||||||
RefSeq | protein | NM_001027055.5 | |||||||
NM_061311.6 | |||||||||
NM_061310.6 | |||||||||
NR_132575.1 | |||||||||
TREEFAM | TREEFAM_ID | TF321767 | |||||||
TrEMBL | UniProtAcc | H2KY96 | |||||||
Q9TZ47 | |||||||||
H2KY97 | |||||||||
UniProt_GCRP | UniProtAcc | H2KY97 | |||||||
RNAcentral | URSid | URS000084088A | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 05 Jul 2004 15:44:18 | WBPerson1971 | Name_change | CGC_name | cbn-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cbn | ||||||||
Allele (109) | |||||||||
Strain | WBStrain00033293 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00124168 | ||||||||
Ortholog (31) | |||||||||
Paralog (16) | |||||||||
Structured_description | Concise_description | cbn-1 encodes a protein that contains a predicted signal peptide and calcium-binding EF-hand motifs. | Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 07 Dec 2007 00:00:00 | ||||||||
Automated_description | Predicted to enable calcium ion binding activity. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K01A2.11a | |||||||
K01A2.11b | |||||||||
K01A2.11d | |||||||||
Corresponding_CDS_history | K01A2.11a:wp112 | ||||||||
K01A2.11c:wp248 | |||||||||
Corresponding_transcript | K01A2.11c | ||||||||
K01A2.11a.1 | |||||||||
K01A2.11b.1 | |||||||||
K01A2.11d.1 | |||||||||
Other_sequence (17) | |||||||||
Associated_feature (13) | |||||||||
Experimental_info | RNAi_result | WBRNAi00076531 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016367 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00049586 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00115899 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033803 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00001526 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027074 | ||||||||
Expr1038335 | |||||||||
Expr1153313 | |||||||||
Expr2009741 | |||||||||
Expr2027981 | |||||||||
Drives_construct | WBCnstr00025945 | ||||||||
Construct_product | WBCnstr00025945 | ||||||||
Microarray_results | SMD_K01A2.11 | ||||||||
187124_s_at | |||||||||
A_12_P106057 | |||||||||
A_12_P106081 | |||||||||
A_12_P107774 | |||||||||
Aff_K01A2.11A | |||||||||
Aff_K01A2.11B | |||||||||
GPL13394_WBGene00019285 | |||||||||
GPL13914_K01A2.11 | |||||||||
GPL14144_K01A2.11d_1074-1133_0.873_25_A | |||||||||
GPL14144_K01A2.11d_1309-1368_0.862_30_C | |||||||||
GPL14144_K01A2.11d_809-868_0.869_27_B | |||||||||
GPL19516_CGZ0027089 | |||||||||
GPL19516_CGZ0027090 | |||||||||
GPL19516_CGZ0027091 | |||||||||
GPL19516_CGZ0027092 | |||||||||
GPL21109_K01A2.11a | |||||||||
GPL3518_CE19520 | |||||||||
GPL3518_CE19521 | |||||||||
GPL8304_CE_WBGene00019285_A | |||||||||
GPL8673_K01A2_11aP00378 | |||||||||
GPL8673_K01A2_11aP00785 | |||||||||
GPL8673_K01A2_11aP01573 | |||||||||
GPL8673_K01A2_11bP00229 | |||||||||
GPL8673_K01A2_11bP00378 | |||||||||
GPL8673_K01A2_11bP00785 | |||||||||
GPL8673_K01A2_11cP00229 | |||||||||
GPL8673_K01A2_11cP00378 | |||||||||
GPL8673_K01A2_11cP00785 | |||||||||
GPL8673_K01A2_11dP00785 | |||||||||
GPL8673_K01A2_11dP01974 | |||||||||
GPL8673_K01A2_11dP01981 | |||||||||
GPL9450_K01A2.11a | |||||||||
GPL9450_K01A2.11b | |||||||||
cea2.d.07978 | |||||||||
cea2.p.42050 | |||||||||
Expression_cluster (222) | |||||||||
Map_info | Map | II | Position | -15.6229 | Error | 0.000884 | |||
Positive | Positive_clone | K01A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00025051 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |