WormBase Tree Display for Gene: WBGene00016194
expand all nodes | collapse all nodes | view schema
WBGene00016194 | SMap | S_parent | Sequence | C28H8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C28H8.3 | |||||||
Molecular_name | C28H8.3 | ||||||||
C28H8.3.1 | |||||||||
CE29195 | |||||||||
Other_name | CELE_C28H8.3 | Accession_evidence | NDB | BX284603 | |||||
Public_name | C28H8.3 | ||||||||
DB_info | Database | AceView | gene | 3H3 | |||||
WormQTL | gene | WBGene00016194 | |||||||
WormFlux | gene | WBGene00016194 | |||||||
NDB | locus_tag | CELE_C28H8.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016194|UniProtKB=Q09475 | |||||||
family | PTHR44533 | ||||||||
NCBI | gene | 175834 | |||||||
RefSeq | protein | NM_065882.6 | |||||||
KEGG | KEGG_id | 3.6.4.- | |||||||
NemaPath | KEGG_id | 3.6.4.- | |||||||
SwissProt | UniProtAcc | Q09475 | |||||||
TREEFAM | TREEFAM_ID | TF314846 | |||||||
UniProt_GCRP | UniProtAcc | Q09475 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (61) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00054113 | ||||||||
00054114 | |||||||||
00054115 | |||||||||
00054116 | |||||||||
00054117 | |||||||||
00054118 | |||||||||
00054119 | |||||||||
00121874 | |||||||||
00121875 | |||||||||
Contained_in_operon | CEOP3350 | ||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00008502 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00012342 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00012896 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00013189 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020964 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00021905 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable several functions, including ATP binding activity; helicase activity; and nucleic acid binding activity. Predicted to be located in cytoplasm. Is an ortholog of human DDX60 (DExD/H-box helicase 60) and DDX60L (DExD/H-box 60 like). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C28H8.3 | |||||||
Corresponding_transcript | C28H8.3.1 | ||||||||
Other_sequence (58) | |||||||||
Associated_feature | WBsf992573 | ||||||||
WBsf992574 | |||||||||
WBsf1014981 | |||||||||
WBsf225023 | |||||||||
WBsf225024 | |||||||||
WBsf225025 | |||||||||
Experimental_info | RNAi_result | WBRNAi00075524 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011312 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000517 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041429 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005112 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016522 | ||||||||
Expr1036930 | |||||||||
Expr1145459 | |||||||||
Expr2001205 | |||||||||
Expr2019427 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (117) | |||||||||
Interaction | WBInteraction000223381 | ||||||||
WBInteraction000237522 | |||||||||
WBInteraction000253686 | |||||||||
WBInteraction000260106 | |||||||||
WBInteraction000292351 | |||||||||
WBInteraction000332115 | |||||||||
WBInteraction000351849 | |||||||||
WBInteraction000378594 | |||||||||
WBInteraction000382608 | |||||||||
WBInteraction000385004 | |||||||||
WBInteraction000431539 | |||||||||
WBInteraction000449915 | |||||||||
WBInteraction000459498 | |||||||||
WBInteraction000541545 | |||||||||
WBInteraction000554501 | |||||||||
WBInteraction000555021 | |||||||||
WBInteraction000556460 | |||||||||
WBInteraction000563053 | |||||||||
WBInteraction000568730 | |||||||||
WBInteraction000573823 | |||||||||
WBInteraction000574705 | |||||||||
WBInteraction000578039 | |||||||||
WBInteraction000579249 | |||||||||
WBInteraction000585878 | |||||||||
WBInteraction000586721 | |||||||||
Map_info | Positive | Positive_clone | C28H8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | -1.43551 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00049828 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00060878 | |||||||||
Method | Gene |