WormBase Tree Display for Gene: WBGene00020397
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WBGene00020397 | SMap | S_parent | Sequence | T10B11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | pcbd-1 | Person_evidence | WBPerson384 | |||||
Sequence_name | T10B11.1 | ||||||||
Molecular_name | T10B11.1 | ||||||||
T10B11.1.1 | |||||||||
CE39768 | |||||||||
Other_name | CELE_T10B11.1 | Accession_evidence | NDB | BX284601 | |||||
Public_name | pcbd-1 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 28 Sep 2005 14:40:43 | WBPerson2970 | Name_change | CGC_name | pcbd-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pcbd | ||||||||
Allele (17) | |||||||||
Strain | WBStrain00024122 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (6) | |||||||||
Ortholog (36) | |||||||||
Structured_description | Concise_description | pcbd-1 is orthologous to the human gene PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE (PCBD or TCF1; OMIM:126090), which when mutated leads to hyperphenylalaninemia with primapterinuria. | Person_evidence | WBPerson384 | |||||
Curator_confirmed | WBPerson1823 | ||||||||
WBPerson567 | |||||||||
WBPerson1843 | |||||||||
Date_last_updated | 24 May 2010 00:00:00 | ||||||||
Automated_description | Predicted to enable 4-alpha-hydroxytetrahydrobiopterin dehydratase activity. Predicted to be involved in tetrahydrobiopterin biosynthetic process. Expressed in head; hypodermis; neurons; and pharyngeal muscle cell. Human ortholog(s) of this gene implicated in BH4-deficient hyperphenylalaninemia D. Is an ortholog of human PCBD1 (pterin-4 alpha-carbinolamine dehydratase 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0081131 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8646) | ||||
Molecular_info | Corresponding_CDS | T10B11.1 | |||||||
Corresponding_CDS_history | T10B11.1:wp154 | ||||||||
Corresponding_transcript | T10B11.1.1 | ||||||||
Other_sequence (73) | |||||||||
Associated_feature | WBsf643418 | ||||||||
WBsf655782 | |||||||||
WBsf217926 | |||||||||
Experimental_info | RNAi_result | WBRNAi00052994 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00081099 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004194 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035408 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00117094 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr11445 | ||||||||
Expr12167 | |||||||||
Expr1027403 | |||||||||
Expr1038892 | |||||||||
Expr1156597 | |||||||||
Expr2014773 | |||||||||
Expr2033007 | |||||||||
Drives_construct | WBCnstr00020338 | ||||||||
WBCnstr00020345 | |||||||||
WBCnstr00025171 | |||||||||
Construct_product | WBCnstr00025171 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (142) | |||||||||
Interaction (16) | |||||||||
Map_info | Map | I | Position | 1.5698 | Error | 0.011368 | |||
Positive | Positive_clone | T10B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5509 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00034518 | ||||||||
WBPaper00034662 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00046585 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064339 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |