WormBase Tree Display for Gene: WBGene00011817
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WBGene00011817 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | T16H12.9 | |||||||
Molecular_name | T16H12.9 | ||||||||
T16H12.9.1 | |||||||||
CE41453 | |||||||||
Other_name | CELE_T16H12.9 | Accession_evidence | NDB | BX284603 | |||||
Public_name | T16H12.9 | ||||||||
DB_info | Database | AceView | gene | 3L199 | |||||
WormQTL | gene | WBGene00011817 | |||||||
WormFlux | gene | WBGene00011817 | |||||||
NDB | locus_tag | CELE_T16H12.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011817|UniProtKB=P34572 | |||||||
family | PTHR33995 | ||||||||
NCBI | gene | 188562 | |||||||
RefSeq | protein | NM_066843.4 | |||||||
SwissProt | UniProtAcc | P34572 | |||||||
TREEFAM | TREEFAM_ID | TF316826 | |||||||
UniProt_GCRP | UniProtAcc | P34572 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (39) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (20) | |||||||||
Paralog | WBGene00004124 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00009099 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00009561 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00044582 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00219375 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00022386 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in excretory cell; intestine; neuronal sheath cell; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by six chemicals including rotenone; antimycin; and Cadmium Chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Cystine-knot cytokine. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T16H12.9 | |||||||
Corresponding_CDS_history | T16H12.9:wp59 | ||||||||
T16H12.9:wp179 | |||||||||
Corresponding_transcript | T16H12.9.1 | ||||||||
Other_sequence | JI172934.1 | ||||||||
Tcol_isotig13736 | |||||||||
Oden_isotig29624 | |||||||||
Acan_isotig00331 | |||||||||
PPC13733_1 | |||||||||
Associated_feature | WBsf659472 | ||||||||
WBsf225661 | |||||||||
Experimental_info | RNAi_result | WBRNAi00070887 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00097727 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053440 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00097728 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00070886 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018787 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006407 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021826 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00097731 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00099093 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018641 | ||||||||
Expr1157012 | |||||||||
Expr2006226 | |||||||||
Expr2024444 | |||||||||
Drives_construct | WBCnstr00030361 | ||||||||
Construct_product | WBCnstr00030361 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (144) | |||||||||
Interaction (24) | |||||||||
Map_info | Positive | Positive_clone | T16H12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 1.83204 | |||||||
Reference (2) | |||||||||
Method | Gene |