WormBase Tree Display for Gene: WBGene00004027
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WBGene00004027 | SMap | S_parent | Sequence | Y49E10 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pie | ||||||
Allele (78) | |||||||
Legacy_information | [C.elegansII] zu154 : maternal effect lethal, often with two distinct pharynges; additional pharynx and intestinal tissue from P2 (transformed to EMS fate).OA1. Cloned: encodes zinc finger protein, localized to nuclei of germ line blastomeres. [Mello et al. 1992; Mango et al. 1994; EU; JJ] | ||||||
Strain (76) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (33) | |||||||
Ortholog (26) | |||||||
Paralog (20) | |||||||
Structured_description | Concise_description | pie-1 encodes a C-x8-C-x5-C-x3-H-type zinc-finger protein; maternally provided PIE-1 is essential for germline cell fate determination, as it functions as a repressor of RNA polymerase II-dependent gene expression in the developing germ line; PIE-1 localization, initially uniform and then concentrated in the posterior germ cell lineages, is regulated by other maternally supplied gene products including PAR-1, MEX-5, and MEX-6. | Paper_evidence | WBPaper00004304 | |||
WBPaper00004631 | |||||||
WBPaper00005297 | |||||||
WBPaper00005347 | |||||||
WBPaper00005605 | |||||||
WBPaper00005735 | |||||||
WBPaper00005791 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 30 Nov 2004 00:00:00 | ||||||
Automated_description | Predicted to enable mRNA 3'-UTR binding activity. Involved in several processes, including embryonic pattern specification; formation of primary germ layer; and negative regulation of nitrogen compound metabolic process. Located in several cellular components, including P granule; centrosome; and cytosol. Expressed in germ line; head muscle; and nerve ring. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y49E10.14a | |||||
Y49E10.14b | |||||||
Corresponding_CDS_history | Y49E10.14:wp52 | ||||||
Corresponding_transcript (2) | |||||||
Other_sequence | U62896 | ||||||
CBC08706_1 | |||||||
CRC03076_1 | |||||||
Associated_feature | WBsf047506 | ||||||
WBsf645660 | |||||||
WBsf659608 | |||||||
WBsf976032 | |||||||
WBsf976033 | |||||||
WBsf976034 | |||||||
WBsf978688 | |||||||
WBsf994644 | |||||||
WBsf225904 | |||||||
Transcription_factor | WBTranscriptionFactor000460 | ||||||
Experimental_info | RNAi_result (65) | ||||||
Expr_pattern (17) | |||||||
Drives_construct (720) | |||||||
Construct_product | WBCnstr00000075 | ||||||
WBCnstr00005204 | |||||||
WBCnstr00005205 | |||||||
WBCnstr00005231 | |||||||
WBCnstr00009806 | |||||||
WBCnstr00010067 | |||||||
WBCnstr00011864 | |||||||
WBCnstr00012536 | |||||||
WBCnstr00013024 | |||||||
WBCnstr00013120 | |||||||
WBCnstr00013121 | |||||||
WBCnstr00013122 | |||||||
WBCnstr00013348 | |||||||
WBCnstr00013733 | |||||||
WBCnstr00019679 | |||||||
WBCnstr00020081 | |||||||
WBCnstr00020083 | |||||||
WBCnstr00040201 | |||||||
Regulate_expr_cluster | WBPaper00061478:pie-1(ne4303)_upregulated | ||||||
WBPaper00061478:pie-1(ne4433)_upregulated | |||||||
Antibody | WBAntibody00000118 | ||||||
WBAntibody00000189 | |||||||
WBAntibody00000697 | |||||||
WBAntibody00001076 | |||||||
WBAntibody00001395 | |||||||
WBAntibody00001588 | |||||||
WBAntibody00001589 | |||||||
Microarray_results (24) | |||||||
Expression_cluster (152) | |||||||
Interaction (309) | |||||||
WBProcess | WBbiopr:00000017 | ||||||
Map_info | Map | III | Position | 17.7453 | Error | 0.045821 | |
Well_ordered | |||||||
Positive | Inside_rearr | ctDf3 | |||||
Positive_clone | pJP604 | ||||||
Y49E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point (11) | ||||||
Pos_neg_data | 8413 | ||||||
8414 | |||||||
8548 | |||||||
8557 | |||||||
Landmark_gene | |||||||
Reference (314) | |||||||
Method | Gene |