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WormBase Tree Display for Gene: WBGene00001824

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Name Class

WBGene00001824EvidenceCGC_data_submission
SMapS_parentSequenceF13D11
IdentityVersion1
NameCGC_namehbl-1Person_evidenceWBPerson698
Sequence_nameF13D11.2
Molecular_nameF13D11.2a
F13D11.2a.1
CE27956
F13D11.2b
CE23646
F13D11.2b.1
Other_namelin-57
CELE_F13D11.2Accession_evidenceNDBBX284606
Public_namehbl-1
DB_infoDatabaseWormQTLgeneWBGene00001824
WormFluxgeneWBGene00001824
NDBlocus_tagCELE_F13D11.2
PanthergeneCAEEL|WormBase=WBGene00001824|UniProtKB=Q9XYD3
familyPTHR24392
NCBIgene180848
RefSeqproteinNM_001047778.5
NM_001047779.5
SwissProtUniProtAccQ9XYD3
TREEFAMTREEFAM_IDTF326588
TrEMBLUniProtAccQ27GU0
UniProt_GCRPUniProtAccQ9XYD3
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhbl
Allele (73)
Possibly_affected_byWBVar02152888
Strain (11)
RNASeq_FPKM (74)
GO_annotation (19)
Ortholog (32)
ParalogWBGene00016189Caenorhabditis elegansFrom_analysisPanther
WBGene00005009Caenorhabditis elegansFrom_analysisPanther
WBGene00003033Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008762Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012385Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionhbl-1 encodes a C2H2-type zinc finger transcription factor related to Drosophila hunchback; hbl-1 is a heterochronic gene that plays an essential role in regulating developmental timing during postembryonic development; accordingly, mutations in hbl-1 affect locomotion, egg laying, body morphology, and hypodermal differentiation; hbl-1 is expressed in hypodermal precursor cells, neuronal precursor cells, and pharyngeal cells during embryogenesis and is primarily expressed in neurons during larval development; hbl-1 expression is negatively regulated by the let-7 miRNA whose expression is, in turn, negatively regulated by HBL-1 in a negative feedback loop.Paper_evidenceWBPaper00003392
WBPaper00005908
WBPaper00005909
WBPaper00034754
Curator_confirmedWBPerson48
WBPerson1843
Date_last_updated20 Aug 2009 00:00:00
Automated_descriptionEnables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in several processes, including egg-laying behavior; negative regulation of transcription by RNA polymerase II; and nematode larval development. Located in nucleus. Expressed in several structures, including body wall musculature; germ line; hypodermis; neurons; and ventral nerve cord.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF13D11.2a
F13D11.2b
Corresponding_CDS_historyF13D11.2:wp155
Corresponding_transcriptF13D11.2a.1
F13D11.2b.1
Other_sequenceJI462622.1
JI164262.1
Oden_isotig23540
SC01112
JI164529.1
MI07402
MIC06569_1
GR977958.1
Associated_featureWBsf019183
WBsf019184
WBsf019185
WBsf019186
WBsf019187
WBsf019188
WBsf019189
WBsf019190
WBsf019191
WBsf019192
WBsf019193
WBsf019194
WBsf662821
WBsf662822
WBsf662823
WBsf662824
WBsf662825
WBsf662826
WBsf662827
WBsf662828
WBsf662829
WBsf662830
WBsf716625
WBsf716626
WBsf718598
WBsf978668
WBsf1005398
WBsf1005399
WBsf1005400
WBsf1005401
WBsf1005402
WBsf1005403
WBsf1005404
WBsf1023016
WBsf1023017
WBsf1023018
WBsf1023019
WBsf1023020
WBsf1023021
WBsf235756
WBsf235757
WBsf235758
WBsf235759
Transcription_factorWBTranscriptionFactor000175
Experimental_infoRNAi_resultWBRNAi00061034Inferred_automaticallyRNAi_primary
WBRNAi00101596Inferred_automaticallyRNAi_primary
WBRNAi00062591Inferred_automaticallyRNAi_primary
WBRNAi00068381Inferred_automaticallyRNAi_primary
WBRNAi00065498Inferred_automaticallyRNAi_primary
WBRNAi00084704Inferred_automaticallyRNAi_primary
WBRNAi00025090Inferred_automaticallyRNAi_primary
WBRNAi00080650Inferred_automaticallyRNAi_primary
WBRNAi00061031Inferred_automaticallyRNAi_primary
WBRNAi00027870Inferred_automaticallyRNAi_primary
WBRNAi00064771Inferred_automaticallyRNAi_primary
WBRNAi00080651Inferred_automaticallyRNAi_primary
WBRNAi00061026Inferred_automaticallyRNAi_primary
WBRNAi00068379Inferred_automaticallyRNAi_primary
WBRNAi00062590Inferred_automaticallyRNAi_primary
WBRNAi00061027Inferred_automaticallyRNAi_primary
WBRNAi00068380Inferred_automaticallyRNAi_primary
WBRNAi00075399Inferred_automaticallyRNAi_primary
WBRNAi00101580Inferred_automaticallyRNAi_primary
WBRNAi00068865Inferred_automaticallyRNAi_primary
WBRNAi00061040Inferred_automaticallyRNAi_primary
WBRNAi00084705Inferred_automaticallyRNAi_primary
WBRNAi00101564Inferred_automaticallyRNAi_primary
WBRNAi00008647Inferred_automaticallyRNAi_primary
WBRNAi00069762Inferred_automaticallyRNAi_primary
WBRNAi00107446Inferred_automaticallyRNAi_primary
WBRNAi00086610Inferred_automaticallyRNAi_primary
WBRNAi00061035Inferred_automaticallyRNAi_primary
WBRNAi00107559Inferred_automaticallyRNAi_primary
WBRNAi00101572Inferred_automaticallyRNAi_primary
WBRNAi00080654Inferred_automaticallyRNAi_primary
WBRNAi00087796Inferred_automaticallyRNAi_primary
WBRNAi00101568Inferred_automaticallyRNAi_primary
WBRNAi00101584Inferred_automaticallyRNAi_primary
WBRNAi00101576Inferred_automaticallyRNAi_primary
WBRNAi00063923Inferred_automaticallyRNAi_primary
WBRNAi00068867Inferred_automaticallyRNAi_primary
WBRNAi00086655Inferred_automaticallyRNAi_primary
WBRNAi00080655Inferred_automaticallyRNAi_primary
WBRNAi00088527Inferred_automaticallyRNAi_primary
WBRNAi00061033Inferred_automaticallyRNAi_primary
WBRNAi00061029Inferred_automaticallyRNAi_primary
WBRNAi00080652Inferred_automaticallyRNAi_primary
WBRNAi00082177Inferred_automaticallyRNAi_primary
WBRNAi00061038Inferred_automaticallyRNAi_primary
WBRNAi00061036Inferred_automaticallyRNAi_primary
WBRNAi00107128Inferred_automaticallyRNAi_primary
WBRNAi00080653Inferred_automaticallyRNAi_primary
WBRNAi00064743Inferred_automaticallyRNAi_primary
WBRNAi00065499Inferred_automaticallyRNAi_primary
WBRNAi00093871Inferred_automaticallyRNAi_primary
WBRNAi00088529Inferred_automaticallyRNAi_primary
WBRNAi00107247Inferred_automaticallyRNAi_primary
WBRNAi00093874Inferred_automaticallyRNAi_primary
WBRNAi00082181Inferred_automaticallyRNAi_primary
WBRNAi00101592Inferred_automaticallyRNAi_primary
WBRNAi00101588Inferred_automaticallyRNAi_primary
WBRNAi00078059Inferred_automaticallyRNAi_primary
WBRNAi00061037Inferred_automaticallyRNAi_primary
WBRNAi00068866Inferred_automaticallyRNAi_primary
WBRNAi00082175Inferred_automaticallyRNAi_primary
WBRNAi00063922Inferred_automaticallyRNAi_primary
WBRNAi00107488Inferred_automaticallyRNAi_primary
WBRNAi00090739Inferred_automaticallyRNAi_primary
WBRNAi00086656Inferred_automaticallyRNAi_primary
WBRNAi00086652Inferred_automaticallyRNAi_primary
WBRNAi00090738Inferred_automaticallyRNAi_primary
WBRNAi00110430Inferred_automaticallyRNAi_primary
WBRNAi00086611Inferred_automaticallyRNAi_primary
WBRNAi00044496Inferred_automaticallyRNAi_primary
WBRNAi00001884Inferred_automaticallyRNAi_primary
WBRNAi00080657Inferred_automaticallyRNAi_primary
WBRNAi00107077Inferred_automaticallyRNAi_primary
WBRNAi00082179Inferred_automaticallyRNAi_primary
WBRNAi00061028Inferred_automaticallyRNAi_primary
WBRNAi00088528Inferred_automaticallyRNAi_primary
WBRNAi00080656Inferred_automaticallyRNAi_primary
WBRNAi00107185Inferred_automaticallyRNAi_primary
Expr_pattern (15)
Drives_construct (11)
Construct_productWBCnstr00000374
WBCnstr00009982
WBCnstr00017352
WBCnstr00019440
WBCnstr00036665
Microarray_results (27)
Expression_cluster (229)
Interaction (217)
Anatomy_functionWBbtf0427
WBProcessWBbiopr:00000083
Map_infoMapXPosition-4.26909Error0.011372
PositivePositive_cloneF13D11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4396
Pseudo_map_position
Reference (125)
RemarkSequence connection from [Abrahante JE, Rougvie AE]
old_name lin-57 becomes new_name hbl-1 from [Abrahante JE, Rougvie AE].
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene