WormBase Tree Display for Gene: WBGene00021981
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| WBGene00021981 | SMap | S_parent | Sequence | Y58G8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lgc-26 | Paper_evidence | WBPaper00029376 | |||||
| Person_evidence | WBPerson1430 | ||||||||
| Sequence_name | Y58G8A.1 | ||||||||
| Molecular_name | Y58G8A.1 | ||||||||
| Y58G8A.1.1 | |||||||||
| CE24478 | |||||||||
| Other_name | CELE_Y58G8A.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | lgc-26 | ||||||||
| DB_info | Database | AceView | gene | 5A749 | |||||
| WormQTL | gene | WBGene00021981 | |||||||
| WormFlux | gene | WBGene00021981 | |||||||
| NDB | locus_tag | CELE_Y58G8A.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021981|UniProtKB=Q9N4R6 | |||||||
| family | PTHR18945 | ||||||||
| NCBI | gene | 178554 | |||||||
| RefSeq | protein | NM_070766.5 | |||||||
| TrEMBL | UniProtAcc | Q9N4R6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N4R6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 May 2007 16:58:23 | WBPerson2970 | Name_change | CGC_name | lgc-26 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lgc | ||||||||
| Allele | WBVar01499528 | ||||||||
| WBVar02123927 | |||||||||
| WBVar01499167 | |||||||||
| WBVar01734964 | |||||||||
| WBVar00579455 | |||||||||
| WBVar01499740 | |||||||||
| WBVar02022879 | |||||||||
| WBVar02022880 | |||||||||
| WBVar01516566 | |||||||||
| WBVar01516567 | |||||||||
| WBVar01516568 | |||||||||
| WBVar01516569 | |||||||||
| WBVar01499775 | |||||||||
| WBVar01773112 | |||||||||
| WBVar02121232 | |||||||||
| WBVar01773113 | |||||||||
| WBVar01773114 | |||||||||
| WBVar00200695 | |||||||||
| WBVar01773115 | |||||||||
| WBVar00200696 | |||||||||
| WBVar01773116 | |||||||||
| WBVar01773117 | |||||||||
| WBVar01773118 | |||||||||
| WBVar02123270 | |||||||||
| WBVar02120510 | |||||||||
| WBVar01688848 | |||||||||
| WBVar01688849 | |||||||||
| WBVar01688850 | |||||||||
| WBVar01688851 | |||||||||
| WBVar02121444 | |||||||||
| WBVar00447354 | |||||||||
| WBVar00447355 | |||||||||
| WBVar00447356 | |||||||||
| WBVar00447357 | |||||||||
| WBVar00447358 | |||||||||
| WBVar00447359 | |||||||||
| WBVar00447360 | |||||||||
| WBVar00447361 | |||||||||
| WBVar00447362 | |||||||||
| WBVar00092972 | |||||||||
| WBVar00978253 | |||||||||
| WBVar00978254 | |||||||||
| WBVar02124808 | |||||||||
| WBVar00978255 | |||||||||
| WBVar00978256 | |||||||||
| WBVar00978257 | |||||||||
| WBVar00978258 | |||||||||
| WBVar00978259 | |||||||||
| WBVar00978260 | |||||||||
| WBVar00978261 | |||||||||
| WBVar00978262 | |||||||||
| WBVar00978263 | |||||||||
| WBVar00978264 | |||||||||
| WBVar00978265 | |||||||||
| WBVar00978266 | |||||||||
| WBVar00978267 | |||||||||
| WBVar00978268 | |||||||||
| WBVar00978269 | |||||||||
| WBVar00978270 | |||||||||
| Strain | WBStrain00032199 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (32) | |||||||||
| Paralog (100) | |||||||||
| Structured_description | Concise_description | lgc-26 encodes a ligand-gated ion channel with similarity to the nicotinic acetylcholine receptors; lgc-26 activity is required for endocytosis by coelomocytes; an LGC-26::GFP fusion protein is expressed in coelomocytes and localizes to the cytoplasm. | Paper_evidence | WBPaper00025238 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 01 Sep 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Involved in determination of adult lifespan and endocytosis. Located in cytoplasm. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info (3) | |||||||||
| Experimental_info | RNAi_result (7) | ||||||||
| Expr_pattern | Expr1016562 | ||||||||
| Expr1039666 | |||||||||
| Expr1161158 | |||||||||
| Expr2013105 | |||||||||
| Expr2031337 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction | WBInteraction000051703 | ||||||||
| WBInteraction000051704 | |||||||||
| Map_info | Map | V | Position | -20.005 | Error | 6.9e-05 | |||
| Positive | Positive_clone | Y58G8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025238 | ||||||||
| WBPaper00035230 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
