WormBase Tree Display for Gene: WBGene00021560

WBGene00021560 SMap: S_parent: Sequence: Y45G5AM
  Identity: Version: 2
    Name: CGC_name: coh-4 Person_evidence: WBPerson574
      Sequence_name: Y45G5AM.8
      Molecular_name: Y45G5AM.8a
        Y45G5AM.8a.1
        CE27409
        Y45G5AM.8b
        CE51569
        Y45G5AM.8c
        CE51556
        Y45G5AM.8b.1
        Y45G5AM.8c.1
      Other_name: CELE_Y45G5AM.8 Accession_evidence: NDB BX284605
      Public_name: coh-4
    DB_info: Database: AceView gene 5E652
        WormQTL gene WBGene00021560
        WormFlux gene WBGene00021560
        NDB locus_tag CELE_Y45G5AM.8
        NCBI gene 178818
        RefSeq protein NM_001330833.3
            NM_071760.3
            NM_001330834.3
        TrEMBL UniProtAcc A0A168HB71
            Q95XJ4
            A0A163UTM2
        UniProt_GCRP UniProtAcc Q95XJ4
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 30 Mar 2009 16:33:08 WBPerson9133 Name_change: CGC_name: coh-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: coh
    Allele: WBVar02151425
      WBVar01499528
      WBVar02115276
      WBVar00250821
      WBVar01861024
      WBVar01861025
      WBVar01861026
      WBVar01861027
      WBVar01861028
      WBVar01499740
      WBVar01861029
      WBVar01861030
      WBVar01861031
      WBVar01861032
      WBVar01861033
      WBVar01861034
      WBVar01861035
      WBVar01861036
      WBVar01861037
      WBVar01861038
      WBVar01861039
      WBVar01861040
      WBVar01861041
      WBVar02004727
      WBVar02004728
      WBVar02079237
      WBVar02004729
      WBVar01676800
      WBVar01676801
      WBVar01676802
      WBVar01500129
      WBVar01676803
      WBVar02013562
      WBVar01676804
      WBVar01676805
      WBVar01676806
      WBVar01676807
      WBVar01676808
      WBVar01676809
      WBVar01676810
      WBVar02090675
      WBVar01972896
      WBVar01972897
      WBVar01972898
      WBVar01972899
      WBVar01972900
      WBVar01972901
      WBVar02136195
      WBVar00455624
      WBVar01972902
      WBVar00455625
      WBVar01972903
      WBVar01972904
      WBVar00455626
      WBVar02059781
      WBVar00455627
      WBVar01972905
      WBVar01972906
      WBVar02059782
      WBVar00455628
      WBVar02059783
      WBVar00455629
      WBVar00455630
      WBVar00455631
      WBVar01587920
      WBVar01587921
      WBVar01587922
      WBVar01587923
      WBVar01003803
      WBVar01587924
      WBVar01003804
      WBVar01587925
      WBVar01003805
      WBVar01587926
      WBVar01003806
      WBVar01587927
      WBVar01587928
      WBVar01003807
      WBVar01587929
      WBVar01003808
      WBVar01003809
      WBVar01003810
      WBVar01003811
      WBVar01003812
      WBVar01003813
      WBVar01003814
      WBVar01500192
      WBVar01003815
      WBVar00585048
      WBVar01003816
      WBVar01003817
      WBVar00585049
      WBVar01003818
      WBVar00585051
      WBVar01003819
      WBVar00585052
      WBVar01003820
      WBVar00585053
      WBVar00585054
      WBVar01003821
      WBVar01003822
      WBVar00585058
      WBVar01003823
      WBVar01003824
      WBVar01003825
      WBVar02124229
      WBVar02122021
      WBVar01003826
      WBVar01003827
      WBVar01003828
      WBVar01003829
      WBVar01003830
      WBVar00207961
      WBVar00207962
      WBVar01003831
      WBVar00207963
      WBVar01003832
      WBVar00207964
      WBVar01003833
      WBVar00207965
      WBVar01003834
      WBVar01003835
      WBVar00207966
      WBVar00207967
      WBVar01003836
      WBVar01003837
      WBVar00207968
      WBVar01003838
      WBVar00207969
      WBVar01003839
      WBVar00207970
      WBVar01650138
      WBVar00207971
      WBVar01003840
      WBVar01650139
      WBVar01003841
      WBVar01650140
      WBVar01003842
      WBVar01650141
      WBVar01003843
      WBVar01650142
      WBVar01003844
      WBVar01650143
      WBVar01003845
      WBVar01003846
      WBVar01650144
      WBVar01003847
      WBVar01650145
      WBVar01631008
      WBVar02015362
      WBVar01499496
      WBVar01459260
      WBVar01905292
      WBVar01483857
      WBVar01459264
      WBVar01459265
      WBVar01499316
      WBVar01459266
      WBVar01459268
      WBVar01459269
      WBVar00271879
      WBVar01997399
      WBVar01500066
    Strain: WBStrain00035161
      WBStrain00035162
      WBStrain00035163
      WBStrain00035164
      WBStrain00055740
    RNASeq_FPKM (74)
    GO_annotation: 00089042
    Contained_in_operon: CEOP5562
    Ortholog (20)
    Paralog: WBGene00000592 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
    Structured_description: Concise_description: coh-4 encodes a member of the Rad21/Rec8-like family of cohesion proteins known as kleisins; COH-4, along with its paralogs REC-8 and COH-3, function as members of a meiotic cohesin complex that mediates sister chromatid cohesion. Paper_evidence: WBPaper00034684
          Curator_confirmed: WBPerson1843
          Date_last_updated: 29 Nov 2010 00:00:00
      Automated_description: Involved in meiotic sister chromatid cohesion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y45G5AM.8a
      Y45G5AM.8b
      Y45G5AM.8c
    Corresponding_transcript: Y45G5AM.8a.1
      Y45G5AM.8b.1
      Y45G5AM.8c.1
    Associated_feature: WBsf668649
      WBsf668856
      WBsf668857
      WBsf999747
      WBsf999748
      WBsf999749
      WBsf1019467
      WBsf233561
  Experimental_info: RNAi_result: WBRNAi00056638 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11961
      Expr1039438
      Expr1160110
      Expr2010299
      Expr2028541
    Antibody: WBAntibody00002562
      WBAntibody00002687
    Microarray_results (12)
    Expression_cluster (94)
    Interaction: WBInteraction000554911
      WBInteraction000560270
      WBInteraction000583689
      WBInteraction000584069
  Map_info: Map: V Position: -6.34419 Error: 0.01466
    Positive: Positive_clone: Y45G5AM Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene