WormBase Tree Display for Gene: WBGene00019763
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| WBGene00019763 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name (5) | |||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Nov 2009 10:01:13 | WBPerson9133 | Name_change | CGC_name | galt-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | galt | ||||||||
| Allele | WBVar01499528 | ||||||||
| WBVar01499173 | |||||||||
| WBVar01499174 | |||||||||
| WBVar01490157 | |||||||||
| WBVar01499740 | |||||||||
| WBVar01500129 | |||||||||
| WBVar00459450 | |||||||||
| WBVar00459451 | |||||||||
| WBVar00459452 | |||||||||
| WBVar00459453 | |||||||||
| WBVar00459454 | |||||||||
| WBVar00459455 | |||||||||
| WBVar00459456 | |||||||||
| WBVar00459457 | |||||||||
| WBVar00209947 | |||||||||
| WBVar02043419 | |||||||||
| WBVar01740371 | |||||||||
| WBVar01460107 | |||||||||
| WBVar00094639 | |||||||||
| WBVar01015263 | |||||||||
| WBVar01015264 | |||||||||
| WBVar01015265 | |||||||||
| WBVar01015266 | |||||||||
| WBVar01015267 | |||||||||
| WBVar01015268 | |||||||||
| WBVar01499496 | |||||||||
| WBVar01015269 | |||||||||
| WBVar01015270 | |||||||||
| WBVar01015271 | |||||||||
| WBVar01499316 | |||||||||
| WBVar01015272 | |||||||||
| WBVar01862451 | |||||||||
| WBVar01500066 | |||||||||
| Strain | WBStrain00004765 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (27) | |||||||||
| Structured_description | Concise_description | galt-1 encodes a galactosyltransferase that is a member of a novel glycosyltransferase family of proteins found in a wide variety of multicellular eukaryotes, but not in mammals; when expressed in insect calls, GALT-1 demonstrates manganese-dependent galactosyltransferase activity; loss of galt-1 activity results in animals that are resistant to the toxic effects of the fungal galectin CGL2 from the ink cap mushroom Coprinopsis cinerea. | Paper_evidence | WBPaper00035404 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 31 Oct 2009 00:00:00 | ||||||||
| Automated_description | Enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity. Involved in N-glycan processing and protein galactosylation. Predicted to be located in cytoplasm. Expressed in coelomocyte and intestine. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M03F8.4 | |||||||
| Corresponding_CDS_history | M03F8.4:wp171 | ||||||||
| M03F8.4:wp172 | |||||||||
| Corresponding_transcript | M03F8.4.1 | ||||||||
| Other_sequence | Oden_isotig26282 | ||||||||
| Associated_feature | WBsf646838 | ||||||||
| WBsf646839 | |||||||||
| WBsf661282 | |||||||||
| WBsf661283 | |||||||||
| WBsf231815 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034414 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050884 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017167 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12825 | ||||||||
| Expr1020911 | |||||||||
| Expr1038549 | |||||||||
| Expr1154577 | |||||||||
| Expr2011939 | |||||||||
| Expr2030176 | |||||||||
| Drives_construct | WBCnstr00005988 | ||||||||
| WBCnstr00005989 | |||||||||
| WBCnstr00025612 | |||||||||
| Construct_product | WBCnstr00025612 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction | WBInteraction000281947 | ||||||||
| WBInteraction000412057 | |||||||||
| WBInteraction000524299 | |||||||||
| Map_info | Map | V | Position | -0.748593 | Error | 0.007505 | |||
| Positive | Positive_clone | M03F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035404 | ||||||||
| WBPaper00035585 | |||||||||
| WBPaper00037859 | |||||||||
| WBPaper00042476 | |||||||||
| WBPaper00048269 | |||||||||
| WBPaper00051834 | |||||||||
| WBPaper00065080 | |||||||||
| WBPaper00065106 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
