WormBase Tree Display for Gene: WBGene00019645

WBGene00019645 SMap: S_parent: Sequence: K11D12
  Identity: Version: 2
    Name: CGC_name: swt-7 Paper_evidence: WBPaper00037817
          Person_evidence: WBPerson12258
      Sequence_name: K11D12.5
      Molecular_name: K11D12.5
        K11D12.5.1
        CE12134
      Other_name: CELE_K11D12.5 Accession_evidence: NDB BX284605
      Public_name: swt-7
    DB_info: Database: AceView gene 5F508
        WormQTL gene WBGene00019645
        WormFlux gene WBGene00019645
        NDB locus_tag CELE_K11D12.5
        Panther gene CAEEL|WormBase=WBGene00019645|UniProtKB=O44620
          family PTHR10791
        NCBI gene 178890
        RefSeq protein NM_071948.4
        TREEFAM TREEFAM_ID TF313635
        TrEMBL UniProtAcc O44620
        UniProt_GCRP UniProtAcc O44620
    Species: Caenorhabditis elegans
    History: Version_change (2)
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: swt
    Allele: WBVar02060048
      WBVar01500254
      WBVar00457555
      WBVar00457556
      WBVar01499528
      WBVar01459720
      WBVar01499740
      WBVar01973226
      WBVar00208621
      WBVar00208622
      WBVar00208623
      WBVar00208624
      WBVar01500129
      WBVar00585527
      WBVar00585528
      WBVar01842067
      WBVar01842068
      WBVar01009480
      WBVar01009481
      WBVar01009482
      WBVar01009483
      WBVar01009484
      WBVar01009485
      WBVar01009486
      WBVar01009487
      WBVar01009488
      WBVar00604045
      WBVar02124046
      WBVar01862057
      WBVar01499496
      WBVar01499316
      WBVar01500066
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (45)
    Paralog: WBGene00002295 Caenorhabditis elegans From_analysis: Panther
      WBGene00007384 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010594 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00011190 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00012647 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00016922 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019300 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: swt-7 encodes a transmembrane protein that is a member of the SWEET1 family of sugar transporters. Curator_confirmed: WBPerson1843
          Date_last_updated: 03 Jun 2014 00:00:00
      Automated_description: Predicted to enable sugar transmembrane transporter activity. Involved in defense response to Gram-negative bacterium and innate immune response. Predicted to be located in Golgi membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K11D12.5
    Corresponding_transcript: K11D12.5.1
    Other_sequence (62)
    Associated_feature: WBsf233632
  Experimental_info: RNAi_result: WBRNAi00017009 Inferred_automatically: RNAi_primary
      WBRNAi00034280 Inferred_automatically: RNAi_primary
      WBRNAi00050590 Inferred_automatically: RNAi_primary
      WBRNAi00065097 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023688
      Expr1038483
      Expr1154297
      Expr2017169
      Expr2035305
    Drives_construct: WBCnstr00025705
    Construct_product: WBCnstr00025705
    Microarray_results (19)
    Expression_cluster (158)
    Interaction: WBInteraction000188156
      WBInteraction000315247
      WBInteraction000359514
      WBInteraction000376566
      WBInteraction000406393
      WBInteraction000542656
  Map_info: Map: V Position: -3.5787 Error: 0.002491
    Positive: Positive_clone: K11D12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028482
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene