WormBase Tree Display for Gene: WBGene00018424

WBGene00018424 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 2
    Name: CGC_name: pgph-2 Person_evidence: WBPerson1352
      Sequence_name: F44E7.2
      Molecular_name: F44E7.2
        F44E7.2.1
        CE17072
        F44E7.2.2
      Other_name: CELE_F44E7.2 Accession_evidence: NDB BX284605
      Public_name: pgph-2
    DB_info: Database: AceView gene 5G251
        WormQTL gene WBGene00018424
        WormFlux gene WBGene00018424
        NDB locus_tag CELE_F44E7.2
        Panther gene CAEEL|WormBase=WBGene00018424|UniProtKB=O16247
          family PTHR19288
        NCBI gene 178965
        RefSeq protein NM_072111.7
        TrEMBL UniProtAcc O16247
        UniProt_GCRP UniProtAcc O16247
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 06 Aug 2018 15:31:57 WBPerson1983 Name_change: CGC_name: pgph-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pgph
    Allele: WBVar01014193
      WBVar01014194
      WBVar01014195
      WBVar01014196
      WBVar01499528
      WBVar01488672
      WBVar01014197
      WBVar01997976
      WBVar01014198
      WBVar01014199
      WBVar01997977
      WBVar01014200
      WBVar01014201
      WBVar01014202
      WBVar01014203
      WBVar01014204
      WBVar01014205
      WBVar01014206
      WBVar01014207
      WBVar01014208
      WBVar01014209
      WBVar01014210
      WBVar01014211
      WBVar01014212
      WBVar01014213
      WBVar01014214
      WBVar01014215
      WBVar01808125
      WBVar01014216
      WBVar01808126
      WBVar01014217
      WBVar01808127
      WBVar01014218
      WBVar01808128
      WBVar01808129
      WBVar01014219
      WBVar02150332
      WBVar01014220
      WBVar01014221
      WBVar01014222
      WBVar01014223
      WBVar01014224
      WBVar01499740
      WBVar01014225
      WBVar01651686
      WBVar01014226
      WBVar01651687
      WBVar01651688
      WBVar01014227
      WBVar01651689
      WBVar01014228
      WBVar01014229
      WBVar01014230
      WBVar01014231
      WBVar01014232
      WBVar01014233
      WBVar01014234
      WBVar01740325
      WBVar01740326
      WBVar01014235
      WBVar01740327
      WBVar01740328
      WBVar01500129
      WBVar02043399
      WBVar00459088
      WBVar02043400
      WBVar00459089
      WBVar00459090
      WBVar00459091
      WBVar00459092
      WBVar00459093
      WBVar00459094
      WBVar00209748
      WBVar00459095
      WBVar00209749
      WBVar00209750
      WBVar00459096
      WBVar00209751
      WBVar00209752
      WBVar00209753
      WBVar00209754
      WBVar01973623
      WBVar01973624
      WBVar01973625
      WBVar01973626
      WBVar01973627
      WBVar00310174
      WBVar02136395
      WBVar02136396
      WBVar01862401
      WBVar01862402
      WBVar01689627
      WBVar02023714
      WBVar02023715
      WBVar02023716
      WBVar01499864
      WBVar01499496
      WBVar01499865
      WBVar01499316
      WBVar00260011
      WBVar01500066
    RNASeq_FPKM (74)
    GO_annotation: 00027569
      00027570
      00027571
      00027572
      00123574
    Ortholog (79)
    Paralog: WBGene00007548 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00016664 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00016892 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00019522 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019604 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable phosphatase activity. Predicted to be located in cytoplasm. Is an ortholog of human PDXP (pyridoxal phosphatase) and PGP (phosphoglycolate phosphatase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F44E7.2
    Corresponding_transcript: F44E7.2.1
      F44E7.2.2
    Other_sequence (59)
    Associated_feature: WBsf646827
      WBsf1000083
      WBsf1000084
      WBsf1019685
      WBsf1019686
      WBsf231798
      WBsf231799
  Experimental_info: RNAi_result (11)
    Expr_pattern: Chronogram503
      Expr6071
      Expr1037939
      Expr1151155
      Expr2003721
      Expr2021940
    Drives_construct (2)
    Construct_product: WBCnstr00026528
    Regulate_expr_cluster: WBPaper00065926:pgph-2(overepxreesion)_upregulated
      WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
    Microarray_results (18)
    Expression_cluster (193)
    Interaction (22)
  Map_info: Map: V Position: -1.00324
    Positive: Positive_clone: F44E7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00062352
    WBPaper00063033
    WBPaper00065926
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene