WormBase Tree Display for Gene: WBGene00017678
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WBGene00017678 | SMap | S_parent | Sequence | F21F8 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | asp-12 | Person_evidence | WBPerson261 | |||
Sequence_name | F21F8.4 | ||||||
Molecular_name | F21F8.4 | ||||||
F21F8.4.1 | |||||||
CE09540 | |||||||
F21F8.4.2 | |||||||
Other_name | CELE_F21F8.4 | Accession_evidence | NDB | BX284605 | |||
Public_name | asp-12 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | asp | ||||||
Allele | WBVar01495685 | ||||||
WBVar02136702 | |||||||
WBVar02136703 | |||||||
WBVar02136704 | |||||||
WBVar02136705 | |||||||
WBVar01500129 | |||||||
WBVar01499056 | |||||||
WBVar00213314 | |||||||
WBVar00213315 | |||||||
WBVar00213316 | |||||||
WBVar00213317 | |||||||
WBVar00464303 | |||||||
WBVar00464304 | |||||||
WBVar00464305 | |||||||
WBVar00464306 | |||||||
WBVar00464307 | |||||||
WBVar00464308 | |||||||
WBVar00464309 | |||||||
WBVar00464310 | |||||||
WBVar00464311 | |||||||
WBVar01029993 | |||||||
WBVar01029994 | |||||||
WBVar01029995 | |||||||
WBVar01029996 | |||||||
WBVar01029997 | |||||||
WBVar01029998 | |||||||
WBVar01029999 | |||||||
WBVar01030000 | |||||||
WBVar01499316 | |||||||
WBVar01030001 | |||||||
WBVar01030002 | |||||||
WBVar01030003 | |||||||
WBVar01030004 | |||||||
WBVar01030005 | |||||||
WBVar01030006 | |||||||
WBVar01030007 | |||||||
WBVar01030008 | |||||||
WBVar01030009 | |||||||
WBVar01030010 | |||||||
WBVar01030011 | |||||||
WBVar01030012 | |||||||
WBVar01030013 | |||||||
Strain | WBStrain00055352 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00024932 | ||||||
00024933 | |||||||
00024934 | |||||||
00024935 | |||||||
00024936 | |||||||
00024937 | |||||||
00024938 | |||||||
00024939 | |||||||
00122998 | |||||||
00122999 | |||||||
Contained_in_operon | CEOP5539 | ||||||
Ortholog (32) | |||||||
Paralog (17) | |||||||
Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Involved in innate immune response. Predicted to be located in lysosome. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); chronic fatigue syndrome; and congenital adrenal hyperplasia. Is an ortholog of human REN (renin). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model (17) | ||||||
Molecular_info | Corresponding_CDS | F21F8.4 | |||||
Corresponding_transcript | F21F8.4.1 | ||||||
F21F8.4.2 | |||||||
Other_sequence (69) | |||||||
Associated_feature | WBsf646997 | ||||||
WBsf1000612 | |||||||
WBsf232088 | |||||||
Experimental_info | RNAi_result | WBRNAi00045230 | Inferred_automatically | RNAi_primary | |||
WBRNAi00045229 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013693 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115183 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089050 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076325 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1018685 | ||||||
Expr1149161 | |||||||
Expr2009460 | |||||||
Drives_construct | WBCnstr00027108 | ||||||
Construct_product | WBCnstr00027108 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (338) | |||||||
Interaction (32) | |||||||
Map_info | Map | V | Position | 1.26094 | |||
Positive | Positive_clone | F21F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00028482 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00060662 | |||||||
WBPaper00062322 | |||||||
WBPaper00064284 | |||||||
WBPaper00064728 | |||||||
WBPaper00064841 | |||||||
WBPaper00065681 | |||||||
WBPaper00065877 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |