WormBase Tree Display for Gene: WBGene00016614
expand all nodes | collapse all nodes | view schema
| WBGene00016614 | SMap | S_parent | Sequence | C43H6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | CGC_name | trpp-12 | Person_evidence | WBPerson3188 | |||||
| Sequence_name | C43H6.1 | ||||||||
| Molecular_name | C43H6.1 | ||||||||
| C43H6.1.1 | |||||||||
| CE37619 | |||||||||
| Other_name | CELE_C43H6.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | trpp-12 | ||||||||
| DB_info | Database | AceView | gene | XD31 | |||||
| WormQTL | gene | WBGene00016614 | |||||||
| WormFlux | gene | WBGene00016614 | |||||||
| NDB | locus_tag | CELE_C43H6.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016614|UniProtKB=Q5WRR4 | |||||||
| family | PTHR21581 | ||||||||
| NCBI | gene | 180546 | |||||||
| RefSeq | protein | NM_076038.5 | |||||||
| TREEFAM | TREEFAM_ID | TF320881 | |||||||
| TrEMBL | UniProtAcc | Q5WRR4 | |||||||
| UniProt_GCRP | UniProtAcc | Q5WRR4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Aug 2013 16:40:57 | WBPerson2970 | Name_change | CGC_name | trpp-12 | ||||
| 3 | 08 Aug 2013 16:41:57 | WBPerson2970 | Name_change | CGC_name | trpp-12 | ||||
| 4 | 10 Jun 2014 12:12:12 | WBPerson1983 | Event | Acquires_merge | WBGene00016615 | ||||
| 5 | 02 Mar 2018 10:40:21 | WBPerson4025 | Event | Split_into | WBGene00303045 | ||||
| Acquires_merge | WBGene00016615 | ||||||||
| Split_into | WBGene00303045 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | trpp | ||||||||
| Allele | WBVar00076178 | ||||||||
| WBVar00076179 | |||||||||
| WBVar00076180 | |||||||||
| WBVar00076181 | |||||||||
| WBVar00076182 | |||||||||
| WBVar00076183 | |||||||||
| WBVar00076184 | |||||||||
| WBVar01467913 | |||||||||
| WBVar00299106 | |||||||||
| WBVar01126541 | |||||||||
| WBVar01126542 | |||||||||
| WBVar01126543 | |||||||||
| WBVar01126544 | |||||||||
| WBVar01126545 | |||||||||
| WBVar01126546 | |||||||||
| WBVar01126547 | |||||||||
| WBVar01126548 | |||||||||
| WBVar01126549 | |||||||||
| WBVar01126550 | |||||||||
| WBVar01757726 | |||||||||
| WBVar01126551 | |||||||||
| WBVar01126552 | |||||||||
| WBVar01126553 | |||||||||
| WBVar01126554 | |||||||||
| WBVar01979755 | |||||||||
| WBVar01979756 | |||||||||
| WBVar01979757 | |||||||||
| WBVar01979758 | |||||||||
| WBVar01979759 | |||||||||
| WBVar01979760 | |||||||||
| WBVar01486502 | |||||||||
| WBVar01486503 | |||||||||
| WBVar00310338 | |||||||||
| WBVar01987375 | |||||||||
| WBVar01987376 | |||||||||
| WBVar01987377 | |||||||||
| WBVar01619450 | |||||||||
| WBVar01619451 | |||||||||
| WBVar01619452 | |||||||||
| WBVar01619453 | |||||||||
| WBVar01619454 | |||||||||
| WBVar00300442 | |||||||||
| WBVar02048634 | |||||||||
| WBVar02048635 | |||||||||
| WBVar01499636 | |||||||||
| WBVar02151176 | |||||||||
| WBVar02145350 | |||||||||
| WBVar00301368 | |||||||||
| WBVar00309397 | |||||||||
| WBVar02116337 | |||||||||
| WBVar02151212 | |||||||||
| WBVar00496718 | |||||||||
| WBVar00496719 | |||||||||
| WBVar00496720 | |||||||||
| WBVar00496721 | |||||||||
| WBVar00496722 | |||||||||
| WBVar00496723 | |||||||||
| WBVar01601083 | |||||||||
| WBVar00076177 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00081467 | ||||||||
| 00081468 | |||||||||
| Contained_in_operon | CEOPX028 | ||||||||
| Ortholog (29) | |||||||||
| Structured_description | Automated_description | Predicted to be located in Golgi apparatus. Predicted to be part of TRAPP complex. Is an ortholog of human TRAPPC12 (trafficking protein particle complex subunit 12). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info (5) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011895 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011894 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029772 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011901 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023086 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042400 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042399 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025144 | ||||||||
| Expr1037137 | |||||||||
| Expr1146391 | |||||||||
| Expr2017508 | |||||||||
| Expr2035647 | |||||||||
| Drives_construct | WBCnstr00027936 | ||||||||
| Construct_product | WBCnstr00027936 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (151) | |||||||||
| Interaction | WBInteraction000251396 | ||||||||
| WBInteraction000431223 | |||||||||
| Map_info | Map | X | Position | -15.5671 | |||||
| Positive | Positive_clone | C43H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag. | |||||||||
| Method | Gene |
