WormBase Tree Display for Gene: WBGene00016090

WBGene00016090 SMap: S_parent: Sequence: C25B8
  Identity: Version: 3
    Name: CGC_name: aexr-2 Person_evidence: WBPerson260
      Sequence_name: C25B8.7
      Molecular_name: C25B8.7
        C25B8.7.1
        CE53317
      Other_name: cup-13 Paper_evidence: WBPaper00050677
        CELE_C25B8.7 Accession_evidence: NDB BX284606
      Public_name: aexr-2
    DB_info: Database: AceView gene XH246
        WormQTL gene WBGene00016090
        WormFlux gene WBGene00016090
        NDB locus_tag CELE_C25B8.7
        Panther gene CAEEL|WormBase=WBGene00016090|UniProtKB=Q8MQC4
          family PTHR21643
        NCBI gene 259709
        RefSeq protein NM_001373332.2
        TREEFAM TREEFAM_ID TF316587
        TrEMBL UniProtAcc Q8MQC4
        UniProt_GCRP UniProtAcc Q8MQC4
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 Dec 2011 16:46:04 WBPerson2970 Name_change: CGC_name: aexr-2
        3 17 Feb 2017 10:32:49 WBPerson2970 Name_change: Other_name: cup-13
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: aexr
    Allele: WBVar01498964
      WBVar01550374
      WBVar01550375
      WBVar01489226
      WBVar01881647
      WBVar01881648
      WBVar01881649
      WBVar01881650
      WBVar01881651
      WBVar01926995
      WBVar00034231
      WBVar00034236
      WBVar01758662
      WBVar01758663
      WBVar01820134
      WBVar00506570
      WBVar00506571
      WBVar00506572
      WBVar00506573
      WBVar00506574
      WBVar00506575
      WBVar00506576
      WBVar00506577
      WBVar00506578
      WBVar01155533
      WBVar01155534
      WBVar00506579
      WBVar01155535
      WBVar00506580
      WBVar01155536
      WBVar01155537
      WBVar01499791
      WBVar01155538
      WBVar01155539
      WBVar00259189
      WBVar01155540
      WBVar01155541
      WBVar01155542
      WBVar01155543
      WBVar02064381
      WBVar01155544
      WBVar01155545
      WBVar01155546
      WBVar01155547
      WBVar01155548
      WBVar01155549
      WBVar01155550
      WBVar01155551
      WBVar01155552
      WBVar01155553
      WBVar01155554
      WBVar01155555
      WBVar01848918
      WBVar00236075
      WBVar00000249
      WBVar02147485
      WBVar02147486
      WBVar00068679
      WBVar02147505
      WBVar02147506
      WBVar02147507
      WBVar02147508
      WBVar02147509
      WBVar02147510
      WBVar00080006
      WBVar02146788
      WBVar01945607
      WBVar01815783
      WBVar00259070
      WBVar01469413
      WBVar01469415
      WBVar01469416
      WBVar01469417
      WBVar01469418
      WBVar01500067
    RNASeq_FPKM (74)
    GO_annotation: 00084531
      00084532
      00121767
      00121768
      00121769
      00121770
      00121771
    Ortholog (17)
    Paralog: WBGene00000085 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00016089 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00016748 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable neuropeptide receptor activity. Involved in lysosome organization. Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C25B8.7
    Corresponding_CDS_history: C25B8.7:wp271
    Corresponding_transcript: C25B8.7.1
    Associated_feature: WBsf654076
      WBsf670643
      WBsf237507
  Experimental_info: RNAi_result: WBRNAi00041167 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019341
      Expr1145196
      Expr2009253
      Expr2027490
    Drives_construct: WBCnstr00028331
    Construct_product: WBCnstr00028331
    Microarray_results (16)
    Expression_cluster (46)
  Map_info: Map: X Position: -2.68005
    Positive: Positive_clone: C25B8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00050677
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene