WormBase Tree Display for Gene: WBGene00015596
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WBGene00015596 | SMap | S_parent | Sequence | C08E3 | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | ||||||||
Name | CGC_name | fbxa-161 | Person_evidence | WBPerson655 | ||||||
Sequence_name | C08E3.4 | |||||||||
Molecular_name | C08E3.4 | |||||||||
Other_name | CELE_C08E3.4 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | fbxa-161 | |||||||||
DB_info | Database | AceView | gene | 2B898 | ||||||
WormQTL | gene | WBGene00015596 | ||||||||
WormFlux | gene | WBGene00015596 | ||||||||
NDB | locus_tag | CELE_C08E3.4 | ||||||||
NCBI | gene | 173534 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
2 | 01 Mar 2007 11:55:18 | WBPerson2970 | Name_change | CGC_name | fbxa-161 | |||||
3 | 30 Jun 2014 14:06:06 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Gene_class | fbxa | |||||||||
Allele | WBVar00094580 | Inferred_automatically | From strain object: RB2599 | |||||||
WBVar01499702 | ||||||||||
WBVar02120604 | ||||||||||
WBVar02123182 | ||||||||||
WBVar02121537 | ||||||||||
WBVar00040256 | ||||||||||
WBVar00040261 | ||||||||||
WBVar02122094 | ||||||||||
WBVar02079761 | ||||||||||
WBVar01911983 | ||||||||||
WBVar01911984 | ||||||||||
WBVar01500106 | ||||||||||
WBVar01911985 | ||||||||||
WBVar02124326 | ||||||||||
WBVar02097461 | ||||||||||
WBVar02097462 | ||||||||||
WBVar01534461 | ||||||||||
WBVar02121946 | ||||||||||
WBVar02123791 | ||||||||||
WBVar01801709 | ||||||||||
WBVar02124543 | ||||||||||
WBVar02122524 | ||||||||||
WBVar02118849 | ||||||||||
WBVar02079645 | ||||||||||
WBVar02079646 | ||||||||||
WBVar01295543 | ||||||||||
WBVar01295544 | ||||||||||
WBVar00545142 | ||||||||||
WBVar01295545 | ||||||||||
WBVar01295546 | ||||||||||
WBVar00545143 | ||||||||||
WBVar01295547 | ||||||||||
WBVar01295548 | ||||||||||
WBVar00091177 | ||||||||||
WBVar01295549 | ||||||||||
WBVar01295551 | ||||||||||
WBVar01295552 | ||||||||||
WBVar01295553 | ||||||||||
WBVar01295554 | ||||||||||
WBVar01295555 | ||||||||||
WBVar01295556 | ||||||||||
WBVar01295557 | ||||||||||
WBVar01295558 | ||||||||||
WBVar01295559 | ||||||||||
WBVar01295560 | ||||||||||
WBVar01295562 | ||||||||||
WBVar01295563 | ||||||||||
WBVar01295564 | ||||||||||
WBVar01295565 | ||||||||||
WBVar01716723 | ||||||||||
WBVar01716724 | ||||||||||
WBVar01716725 | ||||||||||
WBVar01716726 | ||||||||||
WBVar00357398 | ||||||||||
WBVar01716727 | ||||||||||
WBVar00357399 | ||||||||||
WBVar01716728 | ||||||||||
WBVar01716729 | ||||||||||
WBVar00357400 | ||||||||||
WBVar01716730 | ||||||||||
WBVar01716731 | ||||||||||
WBVar01716732 | ||||||||||
WBVar01716733 | ||||||||||
WBVar01716734 | ||||||||||
WBVar01716735 | ||||||||||
WBVar01716736 | ||||||||||
WBVar01762990 | ||||||||||
WBVar01898258 | ||||||||||
WBVar02079706 | ||||||||||
WBVar01898259 | ||||||||||
WBVar02121124 | ||||||||||
WBVar02077668 | ||||||||||
WBVar02077669 | ||||||||||
WBVar00165037 | ||||||||||
WBVar02077670 | ||||||||||
WBVar01665288 | ||||||||||
WBVar01665289 | ||||||||||
WBVar01665290 | ||||||||||
WBVar01665291 | ||||||||||
WBVar01665292 | ||||||||||
WBVar00706425 | ||||||||||
WBVar00706426 | ||||||||||
WBVar00706427 | ||||||||||
WBVar00706428 | ||||||||||
WBVar00706429 | ||||||||||
WBVar02122430 | ||||||||||
WBVar02120776 | ||||||||||
Strain | WBStrain00033274 | |||||||||
RNASeq_FPKM (74) | ||||||||||
Ortholog | WBGene00080375 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
WBGene00084134 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
WBGene00085145 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
WBGene00078863 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||||
Paralog (8) | ||||||||||
Structured_description | Automated_description | Enriched in intestine based on microarray studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including tryptophan; methylmercuric chloride; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | C08E3.4:wp87 | ||||||||
Corresponding_pseudogene | C08E3.4 | |||||||||
Associated_feature | WBsf222703 | |||||||||
Experimental_info | Expr_pattern | Expr1014046 | ||||||||
Expr1144162 | ||||||||||
Microarray_results (13) | ||||||||||
Expression_cluster (95) | ||||||||||
Interaction (77) | ||||||||||
Map_info | Map | II | Position | -15.3384 | Error | 0.005236 | ||||
Positive | Positive_clone | C08E3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |