WormBase Tree Display for Gene: WBGene00015567
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| WBGene00015567 | SMap | S_parent | Sequence | C07D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name (5) | |||||||||
| DB_info | Database | AceView | gene | 2H687 | |||||
| WormQTL | gene | WBGene00015567 | |||||||
| WormFlux | gene | WBGene00015567 | |||||||
| NDB | locus_tag | CELE_C07D10.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015567|UniProtKB=H2KYJ3 | |||||||
| family | PTHR24413 | ||||||||
| NCBI | gene | 174210 | |||||||
| RefSeq | protein | NM_063149.5 | |||||||
| NM_063148.7 | |||||||||
| TREEFAM | TREEFAM_ID | TF313419 | |||||||
| TrEMBL | UniProtAcc | Q17782 | |||||||
| H2KYJ3 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KYJ3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Aug 2005 16:08:42 | WBPerson2970 | Name_change | CGC_name | bath-44 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bath | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar00743854 | |||||||||
| WBVar00743855 | |||||||||
| WBVar00743856 | |||||||||
| WBVar00743857 | |||||||||
| WBVar00743858 | |||||||||
| WBVar00743859 | |||||||||
| WBVar00743860 | |||||||||
| WBVar00743861 | |||||||||
| WBVar00743862 | |||||||||
| WBVar00743863 | |||||||||
| WBVar01498435 | |||||||||
| WBVar00743864 | |||||||||
| WBVar00743865 | |||||||||
| WBVar00743866 | |||||||||
| WBVar00743867 | |||||||||
| WBVar01500110 | |||||||||
| WBVar01438454 | |||||||||
| WBVar00251624 | |||||||||
| WBVar01490420 | |||||||||
| WBVar00370088 | |||||||||
| WBVar00370089 | |||||||||
| WBVar00370090 | |||||||||
| WBVar00370091 | |||||||||
| WBVar00370092 | |||||||||
| WBVar01784017 | |||||||||
| WBVar01666174 | |||||||||
| WBVar00173366 | |||||||||
| WBVar00173367 | |||||||||
| WBVar01498940 | |||||||||
| WBVar01496915 | |||||||||
| WBVar01720269 | |||||||||
| WBVar02151054 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00021687 | ||||||||
| 00021688 | |||||||||
| 00021689 | |||||||||
| 00021690 | |||||||||
| 00021691 | |||||||||
| 00021692 | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00003209 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WBGene00011815 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00016803 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00018137 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00007778 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00009820 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018946 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | The C07D10.2 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis. | Paper_evidence | WBPaper00004589 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and regulation of proteolysis. Predicted to be located in cytoplasm and nucleus. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C07D10.2a | |||||||
| C07D10.2b | |||||||||
| Corresponding_transcript | C07D10.2a.1 | ||||||||
| C07D10.2b.1 | |||||||||
| Other_sequence (24) | |||||||||
| Associated_feature (17) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00088608 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00082914 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000582 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039990 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010379 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085655 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088715 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr413 | ||||||||
| Expr1012215 | |||||||||
| Expr1036668 | |||||||||
| Expr1144069 | |||||||||
| Expr2009561 | |||||||||
| Expr2027798 | |||||||||
| Drives_construct | WBCnstr00028745 | ||||||||
| Construct_product | WBCnstr00028745 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction (48) | |||||||||
| Map_info | Map | II | Position | 0.502905 | Error | 1.5e-05 | |||
| Positive | Positive_clone | C07D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035598 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
