WormBase Tree Display for Gene: WBGene00013980
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| WBGene00013980 | SMap | S_parent | Sequence | ZK507 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dos-1 | Person_evidence | WBPerson242 | |||||
| Sequence_name | ZK507.4 | ||||||||
| Molecular_name | ZK507.4 | ||||||||
| ZK507.4.1 | |||||||||
| CE38765 | |||||||||
| Other_name | CELE_ZK507.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | dos-1 | ||||||||
| DB_info | Database | AceView | gene | 3K191 | |||||
| WormQTL | gene | WBGene00013980 | |||||||
| WormFlux | gene | WBGene00013980 | |||||||
| NDB | locus_tag | CELE_ZK507.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013980|UniProtKB=P34636 | |||||||
| family | PTHR35015 | ||||||||
| NCBI | gene | 191338 | |||||||
| RefSeq | protein | NM_066616.6 | |||||||
| SwissProt | UniProtAcc | P34636 | |||||||
| TREEFAM | TREEFAM_ID | TF315672 | |||||||
| UniProt_GCRP | UniProtAcc | P34636 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 24 Jan 2008 10:42:49 | WBPerson2970 | Name_change | CGC_name | dos-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dos | ||||||||
| Allele | WBVar01710154 | ||||||||
| WBVar01500260 | |||||||||
| WBVar01990304 | |||||||||
| WBVar01838334 | |||||||||
| WBVar00261164 | |||||||||
| WBVar01629214 | |||||||||
| WBVar01629215 | |||||||||
| WBVar01629216 | |||||||||
| WBVar01995620 | |||||||||
| WBVar02132473 | |||||||||
| WBVar01499774 | |||||||||
| WBVar01266924 | |||||||||
| WBVar00093547 | |||||||||
| WBVar00070203 | |||||||||
| WBVar00070208 | |||||||||
| WBVar00404675 | |||||||||
| WBVar00404676 | |||||||||
| WBVar00404677 | |||||||||
| WBVar00404678 | |||||||||
| WBVar00404679 | |||||||||
| WBVar00404680 | |||||||||
| WBVar00848589 | |||||||||
| WBVar00848590 | |||||||||
| WBVar00848591 | |||||||||
| WBVar00848592 | |||||||||
| WBVar00848593 | |||||||||
| WBVar00848594 | |||||||||
| WBVar00848595 | |||||||||
| WBVar00848596 | |||||||||
| WBVar00848597 | |||||||||
| WBVar00848598 | |||||||||
| WBVar00848599 | |||||||||
| WBVar00848600 | |||||||||
| WBVar00848601 | |||||||||
| WBVar00848602 | |||||||||
| WBVar00848603 | |||||||||
| WBVar00848604 | |||||||||
| WBVar00848605 | |||||||||
| WBVar00848606 | |||||||||
| WBVar00848607 | |||||||||
| WBVar00848608 | |||||||||
| WBVar00215382 | |||||||||
| Strain | WBStrain00032542 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00043626 | ||||||||
| 00043627 | |||||||||
| 00043628 | |||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00003887 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00003891 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00019331 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00019640 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Concise_description | dos-1 encodes an unfamilar protein with no clear orthologs outside of nematodes; DOS-1 is paralogous to OSM-7, K02F3.7, and ZK507.4, has a predicted signal sequence with 12 conserved cysteine residues, and may be secreted; DOS-1 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00028499 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 29 Mar 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable Notch binding activity. Predicted to be involved in positive regulation of Notch signaling pathway. Predicted to be located in extracellular space. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK507.4 | |||||||
| Corresponding_CDS_history | ZK507.4:wp144 | ||||||||
| Corresponding_transcript | ZK507.4.1 | ||||||||
| Other_sequence | CJC05627_1 | ||||||||
| Associated_feature | WBsf645462 | ||||||||
| WBsf659386 | |||||||||
| WBsf993572 | |||||||||
| WBsf225519 | |||||||||
| WBsf225520 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059466 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006362 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022036 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088838 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020576 | ||||||||
| Expr1162889 | |||||||||
| Expr2011032 | |||||||||
| Expr2029269 | |||||||||
| Drives_construct | WBCnstr00029398 | ||||||||
| Construct_product | WBCnstr00029398 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction | WBInteraction000235998 | ||||||||
| WBInteraction000334941 | |||||||||
| Map_info | Map | III | Position | 0.16456 | Error | 0.000331 | |||
| Positive | Positive_clone | ZK507 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (4) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
