WormBase Tree Display for Gene: WBGene00013304
expand all nodes | collapse all nodes | view schema
| WBGene00013304 | SMap | S_parent | Sequence | Y57G11C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ptp-5.2 | |||||||
| Sequence_name | Y57G11C.6 | ||||||||
| Molecular_name | Y57G11C.6 | ||||||||
| Y57G11C.6.1 | |||||||||
| CE14936 | |||||||||
| Other_name | CELE_Y57G11C.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ptp-5.2 | ||||||||
| DB_info | Database | AceView | gene | 4P518 | |||||
| WormQTL | gene | WBGene00013304 | |||||||
| WormFlux | gene | WBGene00013304 | |||||||
| NDB | locus_tag | CELE_Y57G11C.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013304|UniProtKB=O18232 | |||||||
| family | PTHR23219 | ||||||||
| NCBI | gene | 190372 | |||||||
| RefSeq | protein | NM_070378.3 | |||||||
| TREEFAM | TREEFAM_ID | TF321196 | |||||||
| TrEMBL | UniProtAcc | O18232 | |||||||
| UniProt_GCRP | UniProtAcc | O18232 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Nov 2018 16:28:50 | WBPerson1983 | Name_change | CGC_name | ptp-5.2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ptp | ||||||||
| Allele | WBVar01732730 | ||||||||
| WBVar01806264 | |||||||||
| WBVar01499527 | |||||||||
| WBVar01806265 | |||||||||
| WBVar01806266 | |||||||||
| WBVar01847365 | |||||||||
| WBVar01847366 | |||||||||
| WBVar01498996 | |||||||||
| WBVar01499925 | |||||||||
| WBVar00961399 | |||||||||
| WBVar00961400 | |||||||||
| WBVar00961401 | |||||||||
| WBVar00961402 | |||||||||
| WBVar00961403 | |||||||||
| WBVar00961404 | |||||||||
| WBVar00961405 | |||||||||
| WBVar00961406 | |||||||||
| WBVar00961407 | |||||||||
| WBVar00961408 | |||||||||
| WBVar00961409 | |||||||||
| WBVar00961410 | |||||||||
| WBVar00961411 | |||||||||
| WBVar00961412 | |||||||||
| WBVar00961413 | |||||||||
| WBVar00961414 | |||||||||
| WBVar01498687 | |||||||||
| WBVar00442001 | |||||||||
| WBVar00442002 | |||||||||
| WBVar00442003 | |||||||||
| WBVar00442004 | |||||||||
| WBVar00442005 | |||||||||
| WBVar00442006 | |||||||||
| WBVar00442007 | |||||||||
| WBVar00195888 | |||||||||
| WBVar00195889 | |||||||||
| WBVar00195890 | |||||||||
| WBVar02037907 | |||||||||
| WBVar00195891 | |||||||||
| WBVar01499492 | |||||||||
| WBVar02146805 | |||||||||
| WBVar01797571 | |||||||||
| WBVar01499493 | |||||||||
| WBVar01797572 | |||||||||
| WBVar01797573 | |||||||||
| WBVar01860057 | |||||||||
| WBVar01500245 | |||||||||
| WBVar01499697 | |||||||||
| WBVar00308150 | |||||||||
| WBVar01732729 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00120197 | ||||||||
| 00120198 | |||||||||
| Ortholog (25) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein tyrosine phosphatase activity. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y57G11C.6 | |||||||
| Corresponding_transcript | Y57G11C.6.1 | ||||||||
| Other_sequence | CRC12534_1 | ||||||||
| CRC06461_1 | |||||||||
| CR03061 | |||||||||
| CR03334 | |||||||||
| Associated_feature | WBsf1018683 | ||||||||
| WBsf231210 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057707 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057708 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037610 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1161136 | ||||||||
| Expr2008076 | |||||||||
| Expr2026315 | |||||||||
| Drives_construct | WBCnstr00029699 | ||||||||
| Construct_product | WBCnstr00029699 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (149) | |||||||||
| Interaction | WBInteraction000360225 | ||||||||
| Map_info (3) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
