WormBase Tree Display for Gene: WBGene00013304
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WBGene00013304 | SMap | S_parent | Sequence | Y57G11C | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ptp-5.2 | |||||||
Sequence_name | Y57G11C.6 | ||||||||
Molecular_name | Y57G11C.6 | ||||||||
Y57G11C.6.1 | |||||||||
CE14936 | |||||||||
Other_name | CELE_Y57G11C.6 | Accession_evidence | NDB | BX284604 | |||||
Public_name | ptp-5.2 | ||||||||
DB_info | Database | AceView | gene | 4P518 | |||||
WormQTL | gene | WBGene00013304 | |||||||
WormFlux | gene | WBGene00013304 | |||||||
NDB | locus_tag | CELE_Y57G11C.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013304|UniProtKB=O18232 | |||||||
family | PTHR23219 | ||||||||
NCBI | gene | 190372 | |||||||
RefSeq | protein | NM_070378.3 | |||||||
TREEFAM | TREEFAM_ID | TF321196 | |||||||
TrEMBL | UniProtAcc | O18232 | |||||||
UniProt_GCRP | UniProtAcc | O18232 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 12 Nov 2018 16:28:50 | WBPerson1983 | Name_change | CGC_name | ptp-5.2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ptp | ||||||||
Allele | WBVar01732730 | ||||||||
WBVar01806264 | |||||||||
WBVar01499527 | |||||||||
WBVar01806265 | |||||||||
WBVar01806266 | |||||||||
WBVar01847365 | |||||||||
WBVar01847366 | |||||||||
WBVar01498996 | |||||||||
WBVar01499925 | |||||||||
WBVar00961399 | |||||||||
WBVar00961400 | |||||||||
WBVar00961401 | |||||||||
WBVar00961402 | |||||||||
WBVar00961403 | |||||||||
WBVar00961404 | |||||||||
WBVar00961405 | |||||||||
WBVar00961406 | |||||||||
WBVar00961407 | |||||||||
WBVar00961408 | |||||||||
WBVar00961409 | |||||||||
WBVar00961410 | |||||||||
WBVar00961411 | |||||||||
WBVar00961412 | |||||||||
WBVar00961413 | |||||||||
WBVar00961414 | |||||||||
WBVar01498687 | |||||||||
WBVar00442001 | |||||||||
WBVar00442002 | |||||||||
WBVar00442003 | |||||||||
WBVar00442004 | |||||||||
WBVar00442005 | |||||||||
WBVar00442006 | |||||||||
WBVar00442007 | |||||||||
WBVar00195888 | |||||||||
WBVar00195889 | |||||||||
WBVar00195890 | |||||||||
WBVar02037907 | |||||||||
WBVar00195891 | |||||||||
WBVar01499492 | |||||||||
WBVar02146805 | |||||||||
WBVar01797571 | |||||||||
WBVar01499493 | |||||||||
WBVar01797572 | |||||||||
WBVar01797573 | |||||||||
WBVar01860057 | |||||||||
WBVar01500245 | |||||||||
WBVar01499697 | |||||||||
WBVar00308150 | |||||||||
WBVar01732729 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (2) | |||||||||
Ortholog (25) | |||||||||
Paralog (20) | |||||||||
Structured_description | Automated_description | Predicted to enable protein tyrosine phosphatase activity. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y57G11C.6 | |||||||
Corresponding_transcript | Y57G11C.6.1 | ||||||||
Other_sequence | CRC12534_1 | ||||||||
CRC06461_1 | |||||||||
CR03061 | |||||||||
CR03334 | |||||||||
Associated_feature | WBsf1018683 | ||||||||
WBsf231210 | |||||||||
Experimental_info | RNAi_result | WBRNAi00057707 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057708 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00037610 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1161136 | ||||||||
Expr2008076 | |||||||||
Expr2026315 | |||||||||
Drives_construct | WBCnstr00029699 | ||||||||
Construct_product | WBCnstr00029699 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (149) | |||||||||
Interaction | WBInteraction000360225 | ||||||||
Map_info | Map | IV | Position | 12.4371 | |||||
Positive | Positive_clone | Y57G11C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |