WormBase Tree Display for Gene: WBGene00013263
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| WBGene00013263 | SMap | S_parent | Sequence | Y57A10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | txdc-12.1 | Person_evidence | WBPerson3772 | |||||
| WBPerson38007 | |||||||||
| Sequence_name | Y57A10A.23 | ||||||||
| Molecular_name | Y57A10A.23 | ||||||||
| Y57A10A.23.1 | |||||||||
| CE22626 | |||||||||
| Other_name | CELE_Y57A10A.23 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | txdc-12.1 | ||||||||
| DB_info | Database | AceView | gene | 2M531 | |||||
| WormQTL | gene | WBGene00013263 | |||||||
| WormFlux | gene | WBGene00013263 | |||||||
| NDB | locus_tag | CELE_Y57A10A.23 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013263|UniProtKB=Q9NA78 | |||||||
| family | PTHR15337 | ||||||||
| NCBI | gene | 174863 | |||||||
| RefSeq | protein | NM_001383970.2 | |||||||
| TREEFAM | TREEFAM_ID | TF321449 | |||||||
| TrEMBL | UniProtAcc | Q9NA78 | |||||||
| UniProt_GCRP | UniProtAcc | Q9NA78 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 01 Aug 2017 12:58:54 | WBPerson2970 | Name_change | CGC_name | txdc-12.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | txdc | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01539026 | |||||||||
| WBVar00380100 | |||||||||
| WBVar00380101 | |||||||||
| WBVar00380102 | |||||||||
| WBVar01498435 | |||||||||
| WBVar00177094 | |||||||||
| WBVar01383233 | |||||||||
| WBVar02125130 | |||||||||
| WBVar01605389 | |||||||||
| WBVar01605390 | |||||||||
| WBVar01258117 | |||||||||
| WBVar01499956 | |||||||||
| WBVar00774150 | |||||||||
| WBVar00774151 | |||||||||
| WBVar00774152 | |||||||||
| WBVar00774153 | |||||||||
| WBVar01577010 | |||||||||
| WBVar00774154 | |||||||||
| WBVar00774155 | |||||||||
| WBVar00774156 | |||||||||
| WBVar00774157 | |||||||||
| WBVar00774158 | |||||||||
| WBVar00774159 | |||||||||
| WBVar00774160 | |||||||||
| WBVar00774161 | |||||||||
| WBVar00774162 | |||||||||
| WBVar00774163 | |||||||||
| WBVar00774164 | |||||||||
| WBVar00774165 | |||||||||
| WBVar00774166 | |||||||||
| WBVar00230101 | |||||||||
| WBVar01547504 | |||||||||
| WBVar01547505 | |||||||||
| WBVar01547506 | |||||||||
| WBVar01943876 | |||||||||
| WBVar01378432 | |||||||||
| WBVar02130852 | |||||||||
| WBVar01766651 | |||||||||
| WBVar00553932 | |||||||||
| WBVar02109861 | |||||||||
| WBVar00311236 | |||||||||
| WBVar00311237 | |||||||||
| WBVar01313869 | |||||||||
| WBVar01891903 | |||||||||
| WBVar01891904 | |||||||||
| WBVar01891905 | |||||||||
| WBVar01891906 | |||||||||
| WBVar01891907 | |||||||||
| WBVar01891908 | |||||||||
| WBVar01891909 | |||||||||
| WBVar01891910 | |||||||||
| WBVar01498941 | |||||||||
| WBVar02067045 | |||||||||
| WBVar02033801 | |||||||||
| WBVar02067046 | |||||||||
| WBVar02116898 | |||||||||
| WBVar02033802 | |||||||||
| WBVar01823180 | |||||||||
| WBVar02033803 | |||||||||
| WBVar00296758 | |||||||||
| Strain | WBStrain00002731 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00095844 | ||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00018656 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable oxidoreductase activity. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in breast cancer; pancreatic ductal adenocarcinoma; and pancreatic ductal carcinoma. Is an ortholog of human TXNDC12 (thioredoxin domain containing 12). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3587 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:328) | ||||
| DOID:3498 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:328) | ||||||
| DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:328) | ||||||
| Molecular_info | Corresponding_CDS | Y57A10A.23 | |||||||
| Corresponding_transcript | Y57A10A.23.1 | ||||||||
| Other_sequence (86) | |||||||||
| Associated_feature | WBsf222252 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00057625 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037562 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021100 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7070 | ||||||||
| Expr1022917 | |||||||||
| Expr1035918 | |||||||||
| Expr1161035 | |||||||||
| Expr2008013 | |||||||||
| Expr2026254 | |||||||||
| Drives_construct | WBCnstr00003261 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (304) | |||||||||
| Interaction (9) | |||||||||
| Map_info | Map | II | Position | 7.28631 | |||||
| Positive | Positive_clone | Y57A10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
