WormBase Tree Display for Gene: WBGene00011874
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WBGene00011874 | SMap | S_parent | Sequence | T20G5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | T20G5.13 | |||||||
Molecular_name | T20G5.13 | ||||||||
T20G5.13.1 | |||||||||
CE30303 | |||||||||
Other_name | CELE_T20G5.13 | Accession_evidence | NDB | BX284603 | |||||
Public_name | T20G5.13 | ||||||||
DB_info | Database | AceView | gene | 3L290 | |||||
WormQTL | gene | WBGene00011874 | |||||||
WormFlux | gene | WBGene00011874 | |||||||
NDB | locus_tag | CELE_T20G5.13 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011874|UniProtKB=Q8T3C6 | |||||||
family | PTHR46705 | ||||||||
NCBI | gene | 260150 | |||||||
RefSeq | protein | NM_171225.2 | |||||||
TREEFAM | TREEFAM_ID | TF315483 | |||||||
TrEMBL | UniProtAcc | Q8T3C6 | |||||||
UniProt_GCRP | UniProtAcc | Q8T3C6 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele | WBVar01500260 | ||||||||
WBVar02123388 | |||||||||
WBVar01827894 | |||||||||
WBVar01499774 | |||||||||
WBVar01447916 | |||||||||
WBVar01447917 | |||||||||
WBVar00216328 | |||||||||
WBVar01904102 | |||||||||
WBVar00406865 | |||||||||
WBVar00406866 | |||||||||
WBVar00406867 | |||||||||
WBVar00406868 | |||||||||
WBVar00406869 | |||||||||
WBVar00855023 | |||||||||
WBVar00855024 | |||||||||
WBVar00855025 | |||||||||
WBVar00855026 | |||||||||
WBVar00855027 | |||||||||
WBVar01495968 | |||||||||
WBVar00178447 | |||||||||
WBVar01498954 | |||||||||
WBVar02152157 | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (19) | |||||||||
Paralog (18) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABalaaaarl; ABalaaaarr; ABplpappaa; FLP; and excretory cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on tiling array; RNA-seq; and microarray studies. Is affected by five chemicals including sucrose; stearic acid; and Atrazine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T20G5.13 | |||||||
Corresponding_transcript | T20G5.13.1 | ||||||||
Other_sequence | EX537900.1 | ||||||||
EX540229.1 | |||||||||
ACC38413_1 | |||||||||
Associated_feature | WBsf227419 | ||||||||
Experimental_info | RNAi_result | WBRNAi00053659 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018932 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00063171 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053661 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00063170 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006184 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016445 | ||||||||
Expr1157215 | |||||||||
Expr2006301 | |||||||||
Expr2024521 | |||||||||
Drives_construct | WBCnstr00030319 | ||||||||
Construct_product | WBCnstr00030319 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (59) | |||||||||
Map_info | Positive | Positive_clone | T20G5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 2.00944 | |||||||
Method | Gene |