WormBase Tree Display for Gene: WBGene00010405
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| WBGene00010405 | SMap | S_parent | Sequence | H19N07 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | erfa-3 | Person_evidence | WBPerson124 | |||||
| Sequence_name | H19N07.1 | ||||||||
| Molecular_name | H19N07.1a | ||||||||
| H19N07.1a.1 | |||||||||
| CE32460 | |||||||||
| H19N07.1b | |||||||||
| CE45750 | |||||||||
| H19N07.1b.1 | |||||||||
| Other_name | phi-19 | Person_evidence | WBPerson2582 | ||||||
| CELE_H19N07.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | erfa-3 | ||||||||
| DB_info | Database | AceView | gene | 5L592 | |||||
| WormQTL | gene | WBGene00010405 | |||||||
| WormFlux | gene | WBGene00010405 | |||||||
| NDB | locus_tag | CELE_H19N07.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010405|UniProtKB=O45622 | |||||||
| family | PTHR23115 | ||||||||
| NCBI | gene | 179537 | |||||||
| RefSeq | protein | NM_001269363.4 | |||||||
| NM_001380755.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF300566 | |||||||
| TrEMBL | UniProtAcc | O45622 | |||||||
| E9P8A2 | |||||||||
| UniProt_GCRP | UniProtAcc | O45622 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 30 Sep 2011 16:40:15 | WBPerson2970 | Name_change | CGC_name | erfa-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | erfa | ||||||||
| Allele | WBVar01499538 | ||||||||
| WBVar01499539 | |||||||||
| WBVar01543149 | |||||||||
| WBVar01484683 | |||||||||
| WBVar01865499 | |||||||||
| WBVar02146927 | |||||||||
| WBVar01819432 | |||||||||
| WBVar01974772 | |||||||||
| WBVar01500208 | |||||||||
| WBVar01500209 | |||||||||
| WBVar01461693 | |||||||||
| WBVar01461694 | |||||||||
| WBVar01461695 | |||||||||
| WBVar01046737 | |||||||||
| WBVar01046738 | |||||||||
| WBVar01499299 | |||||||||
| WBVar01046739 | |||||||||
| WBVar01046740 | |||||||||
| WBVar01046741 | |||||||||
| WBVar01046742 | |||||||||
| WBVar01046743 | |||||||||
| WBVar01046744 | |||||||||
| WBVar01046745 | |||||||||
| WBVar01046746 | |||||||||
| WBVar01046747 | |||||||||
| WBVar01046748 | |||||||||
| WBVar01046749 | |||||||||
| WBVar00470037 | |||||||||
| WBVar01046750 | |||||||||
| WBVar00470038 | |||||||||
| WBVar01046751 | |||||||||
| WBVar00470039 | |||||||||
| WBVar02060946 | |||||||||
| WBVar01046752 | |||||||||
| WBVar00470040 | |||||||||
| WBVar01046753 | |||||||||
| WBVar00470041 | |||||||||
| WBVar01046754 | |||||||||
| WBVar00470042 | |||||||||
| WBVar00470043 | |||||||||
| WBVar01499316 | |||||||||
| WBVar00470044 | |||||||||
| WBVar01494171 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP5572 | ||||||||
| Ortholog (41) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable GTPase activity and translation release factor activity. Predicted to be involved in translation. Predicted to be located in cytoplasm. Predicted to be part of translation release factor complex. Is an ortholog of human GSPT1 (G1 to S phase transition 1) and GSPT2 (G1 to S phase transition 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H19N07.1a | |||||||
| H19N07.1b | |||||||||
| Corresponding_CDS_history | H19N07.1:wp90 | ||||||||
| Corresponding_transcript | H19N07.1a.1 | ||||||||
| H19N07.1b.1 | |||||||||
| Other_sequence (121) | |||||||||
| Associated_feature | WBsf653077 | ||||||||
| WBsf1001273 | |||||||||
| WBsf1020404 | |||||||||
| WBsf234498 | |||||||||
| WBsf234499 | |||||||||
| WBsf234500 | |||||||||
| WBsf234501 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern (6) | |||||||||
| Drives_construct | WBCnstr00003449 | ||||||||
| WBCnstr00031438 | |||||||||
| Construct_product | WBCnstr00031438 | ||||||||
| WBCnstr00041295 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (140) | |||||||||
| Interaction (153) | |||||||||
| Map_info | Map | V | Position | 2.94886 | Error | 0.000636 | |||
| Positive | Positive_clone | H19N07 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027281 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00046427 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
