WormBase Tree Display for Gene: WBGene00010055

WBGene00010055 SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 2
    Name: CGC_name: dhgd-1 Person_evidence: WBPerson1997
            WBPerson41219
      Sequence_name: F54D5.12
      Molecular_name: F54D5.12
        F54D5.12.1
        CE26814
        F54D5.12.2
      Other_name: CELE_F54D5.12 Accession_evidence: NDB BX284602
      Public_name: dhgd-1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 04 Jan 2022 10:41:14 WBPerson1983 Name_change: CGC_name: dhgd-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dhgd
    Allele: WBVar02158191
      WBVar00378612
      WBVar00378613
      WBVar00378614
      WBVar01499702
      WBVar00378615
      WBVar00378616
      WBVar00378617
      WBVar00378618
      WBVar00378619
      WBVar01498604
      WBVar00378620
      WBVar00378621
      WBVar00378622
      WBVar01851399
      WBVar01851400
      WBVar01851401
      WBVar00276696
      WBVar01851402
      WBVar01851403
      WBVar01498613
      WBVar01851404
      WBVar01851405
      WBVar01851406
      WBVar01851407
      WBVar01851408
      WBVar01851409
      WBVar01498435
      WBVar02125511
      WBVar01666623
      WBVar01666624
      WBVar01982825
      WBVar01982826
      WBVar01982827
      WBVar01394186
      WBVar01405705
      WBVar01405706
      WBVar00769690
      WBVar00769691
      WBVar00769692
      WBVar01766380
      WBVar00769693
      WBVar01766381
      WBVar00769694
      WBVar00769695
      WBVar00769696
      WBVar00769697
      WBVar00769698
      WBVar00769699
      WBVar02125534
      WBVar00769700
      WBVar00769701
      WBVar00769702
      WBVar00769703
      WBVar00769704
      WBVar00769705
      WBVar00769706
      WBVar00769707
      WBVar01376896
      WBVar01490002
      WBVar00769708
      WBVar00769709
      WBVar00769710
      WBVar00769711
      WBVar00769712
      WBVar00769713
      WBVar00769714
      WBVar00769715
      WBVar00769716
      WBVar00769717
      WBVar00769718
      WBVar00769719
      WBVar00769720
      WBVar00175949
      WBVar00175950
      WBVar00769721
      WBVar00175951
      WBVar00769722
      WBVar00175952
      WBVar00769723
      WBVar00769724
      WBVar00175953
      WBVar00769725
      WBVar00175954
      WBVar00769726
      WBVar00175955
      WBVar00769727
      WBVar00175956
      WBVar00175957
      WBVar00769728
      WBVar00175958
      WBVar00769729
      WBVar00769730
      WBVar00769731
      WBVar00769732
      WBVar00769733
      WBVar00769734
      WBVar00769735
      WBVar00769736
      WBVar00769737
      WBVar01547108
      WBVar00769738
      WBVar01547109
      WBVar01547110
      WBVar00769739
      WBVar01547111
      WBVar00769740
      WBVar01440056
      WBVar01440057
      WBVar00769741
      WBVar00769742
      WBVar00093120
      WBVar00769743
      WBVar00769744
      WBVar00769745
      WBVar00769746
      WBVar00769747
      WBVar00769748
      WBVar00769749
      WBVar00769750
      WBVar00769751
      WBVar00769752
      WBVar00769753
      WBVar01960293
      WBVar02154200
      WBVar00769754
      WBVar00769755
      WBVar02150584
      WBVar00769756
      WBVar00769757
      WBVar00769758
      WBVar00769759
      WBVar00269051
      WBVar00769760
      WBVar02057019
      WBVar00769761
      WBVar02057020
      WBVar00769762
      WBVar00769763
      WBVar00769764
      WBVar01943616
      WBVar00769765
      WBVar00769766
      WBVar00769767
      WBVar00769768
      WBVar00769769
      WBVar00769770
      WBVar00769771
      WBVar00105944
      WBVar00769772
      WBVar00769773
      WBVar00105945
      WBVar01244967
      WBVar01244968
      WBVar00301794
      WBVar01244969
      WBVar02067007
      WBVar01244976
      WBVar02114656
      WBVar02114657
      WBVar00323158
      WBVar01935680
      WBVar01494505
      WBVar01605102
      WBVar01605103
      WBVar01605105
      WBVar01605106
      WBVar01605107
      WBVar01605108
      WBVar01605109
      WBVar01312054
      WBVar01312055
      WBVar01312056
      WBVar01312057
      WBVar01312058
      WBVar01312060
      WBVar01312061
      WBVar01255307
      WBVar01312064
      WBVar01312066
      WBVar01312067
      WBVar00553153
      WBVar01498941
      WBVar00378594
      WBVar00378595
      WBVar00378596
      WBVar00229660
      WBVar00229661
      WBVar00378597
      WBVar00378598
      WBVar00229664
      WBVar00229665
      WBVar00378599
      WBVar00229666
      WBVar00378600
      WBVar00229667
      WBVar00378601
      WBVar00378602
      WBVar00378603
      WBVar00378604
      WBVar00307729
      WBVar02033614
      WBVar00378605
      WBVar02033615
      WBVar00378606
      WBVar00378607
      WBVar02033616
      WBVar00378608
      WBVar00378609
      WBVar00378610
      WBVar00378611
    RNASeq_FPKM (74)
    GO_annotation: 00015395
      00015396
      00117545
      00117546
    Contained_in_operon: CEOP2556
    Ortholog (36)
    Paralog: WBGene00000081 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00009329 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00009334 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable catalytic activity and flavin adenine dinucleotide binding activity. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in D-2-hydroxyglutaric aciduria 1. Is an ortholog of human D2HGDH (D-2-hydroxyglutarate dehydrogenase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0111351 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:28358)
  Molecular_info: Corresponding_CDS: F54D5.12
    Corresponding_CDS_history: F54D5.12:wp42
    Corresponding_transcript: F54D5.12.1
      F54D5.12.2
    Other_sequence (33)
    Associated_feature (11)
  Experimental_info: RNAi_result: WBRNAi00094880 Inferred_automatically: RNAi_primary
      WBRNAi00048309 Inferred_automatically: RNAi_primary
      WBRNAi00021225 Inferred_automatically: RNAi_primary
      WBRNAi00015616 Inferred_automatically: RNAi_primary
      WBRNAi00032788 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020051
      Expr1034386
      Expr1152110
      Expr2004148
      Expr2022372
    Regulate_expr_cluster (2)
    Microarray_results (21)
    Expression_cluster (175)
    Interaction (45)
  Map_info: Map: II Position: 3.74919
    Positive: Positive_clone: F54D5 Inferred_automatically: From sequence, transcript, pseudogene data
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00060111
    WBPaper00063953
    WBPaper00065272
  Remark: [220202 skd] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (3.74151)
  Method: Gene