WormBase Tree Display for Gene: WBGene00006704
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WBGene00006704 | SMap | S_parent | Sequence | F58A4 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ubc | ||||||
Allele | WBVar02157952 | ||||||
WBVar01500260 | |||||||
WBVar00405718 | |||||||
WBVar00405719 | |||||||
WBVar00405720 | |||||||
WBVar01499774 | |||||||
WBVar00092985 | |||||||
WBVar00851576 | |||||||
WBVar00851577 | |||||||
WBVar00851578 | |||||||
WBVar00851579 | |||||||
WBVar00851580 | |||||||
WBVar00851581 | |||||||
WBVar00851582 | |||||||
WBVar00851583 | |||||||
WBVar00851584 | |||||||
Strain | WBStrain00037854 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00042601 | ||||||
00042602 | |||||||
00042603 | |||||||
00042604 | |||||||
00042605 | |||||||
00042606 | |||||||
00042607 | |||||||
00042608 | |||||||
Contained_in_operon | CEOP3608 | ||||||
Ortholog (29) | |||||||
Paralog (18) | |||||||
Structured_description | Concise_description | ubc-7 encodes an E2 ubiquitin-conjugating enzyme; by homology, UBC-7 is predicted to function in the covalent attachment of ubiquitin molecules to protein substrates via its association with an E3 ubiquitin-protein ligase; loss of ubc-7 activity via large-scale RNAi screens results in no obvious abnormalities. | Paper_evidence | WBPaper00005337 | |||
WBPaper00027315 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 30 Jan 2008 00:00:00 | ||||||
Automated_description | Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Is an ortholog of human UBE2G1 (ubiquitin conjugating enzyme E2 G1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F58A4.10 | |||||
Corresponding_transcript | F58A4.10.1 | ||||||
Other_sequence (128) | |||||||
Associated_feature | WBsf655473 | ||||||
WBsf976291 | |||||||
WBsf976292 | |||||||
WBsf976293 | |||||||
WBsf976294 | |||||||
WBsf981547 | |||||||
WBsf227337 | |||||||
WBsf227338 | |||||||
WBsf227339 | |||||||
Experimental_info | RNAi_result (33) | ||||||
Expr_pattern | Expr1024717 | ||||||
Expr1032787 | |||||||
Expr1152664 | |||||||
Expr2017715 | |||||||
Expr2035853 | |||||||
Drives_construct | WBCnstr00034202 | ||||||
Construct_product | WBCnstr00016310 | ||||||
WBCnstr00034202 | |||||||
Microarray_results (23) | |||||||
Expression_cluster (127) | |||||||
Interaction (25) | |||||||
Map_info | Map | III | Position | 0.825444 | Error | 0.007281 | |
Positive | Positive_clone | F58A4 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference (11) | |||||||
Remark | Sequence connection from [Jones D, Crowe E, Stevens TA, Candido EPM], 02/06/10 krb. | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |