WormBase Tree Display for Gene: WBGene00006607
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WBGene00006607 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F57B10 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tre | ||||||
Allele | WBVar00336482 | ||||||
WBVar00336483 | |||||||
WBVar00336484 | |||||||
WBVar00336485 | |||||||
WBVar00336486 | |||||||
WBVar00336487 | |||||||
WBVar00336488 | |||||||
WBVar00091625 | |||||||
WBVar00250655 | |||||||
WBVar02127644 | |||||||
WBVar01499786 | |||||||
WBVar01499054 | |||||||
WBVar00644515 | |||||||
WBVar00644516 | |||||||
WBVar00644517 | |||||||
WBVar00644518 | |||||||
WBVar00644519 | |||||||
WBVar00644520 | |||||||
WBVar00644521 | |||||||
WBVar00644522 | |||||||
WBVar00644523 | |||||||
WBVar00644524 | |||||||
WBVar00644525 | |||||||
WBVar00644526 | |||||||
WBVar00644527 | |||||||
WBVar00644528 | |||||||
WBVar00644529 | |||||||
WBVar00644530 | |||||||
WBVar01993281 | |||||||
WBVar01498959 | |||||||
Strain | WBStrain00031452 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00011029 | ||||||
00011030 | |||||||
00011031 | |||||||
00011032 | |||||||
00011033 | |||||||
00011034 | |||||||
00114451 | |||||||
00114452 | |||||||
00114453 | |||||||
Contained_in_operon | CEOP1336 | ||||||
Ortholog (41) | |||||||
Paralog | WBGene00006610 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00006611 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00006608 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00006609 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable alpha,alpha-trehalase activity. Predicted to be involved in trehalose catabolic process. Is an ortholog of human TREH (trehalase). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F57B10.7 | |||||
Corresponding_transcript | F57B10.7.1 | ||||||
Other_sequence (33) | |||||||
Associated_feature | WBsf643382 | ||||||
WBsf983954 | |||||||
WBsf217851 | |||||||
WBsf217852 | |||||||
Experimental_info | RNAi_result | WBRNAi00116881 | Inferred_automatically | RNAi_primary | |||
WBRNAi00082620 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033011 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00081097 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003842 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048823 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082434 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00000431 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1017089 | ||||||
Expr1032738 | |||||||
Expr1152579 | |||||||
Expr2017488 | |||||||
Expr2035627 | |||||||
Drives_construct | WBCnstr00034273 | ||||||
Construct_product | WBCnstr00034273 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (123) | |||||||
Interaction (20) | |||||||
Map_info | Map | I | Position | 1.21127 | Error | 0.000296 | |
Positive | Positive_clone | F57B10 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 4736 | |||||
Pseudo_map_position | |||||||
Reference (11) | |||||||
Remark | Locus name from allele ok327 of Knock out consortium [030204 ck1] | ||||||
Gene name created from parsing 'genotype' field from CGC strain information | CGC_data_submission | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |