WormBase Tree Display for Gene: WBGene00004174
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WBGene00004174 | SMap | S_parent | Sequence | ZK1067 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | abu-14 | Paper_evidence | WBPaper00038304 | |||||
Person_evidence | WBPerson3 | ||||||||
Sequence_name | ZK1067.7 | ||||||||
Molecular_name | ZK1067.7 | ||||||||
ZK1067.7.1 | |||||||||
CE40244 | |||||||||
Other_name | pqn-95 | Person_evidence | WBPerson265 | ||||||
CELE_ZK1067.7 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | abu-14 | ||||||||
DB_info | Database | AceView | gene | 2J516 | |||||
WormQTL | gene | WBGene00004174 | |||||||
WormFlux | gene | WBGene00004174 | |||||||
NDB | locus_tag | CELE_ZK1067.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004174|UniProtKB=Q23390 | |||||||
family | PTHR31895 | ||||||||
NCBI | gene | 174464 | |||||||
RefSeq | protein | NM_063565.9 | |||||||
TREEFAM | TREEFAM_ID | TF320309 | |||||||
TrEMBL | UniProtAcc | Q23390 | |||||||
UniProt_GCRP | UniProtAcc | Q23390 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 12 Apr 2011 11:48:32 | WBPerson2970 | Name_change (2) | ||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | abu | ||||||||
Allele | WBVar01499702 | ||||||||
WBVar01604421 | |||||||||
WBVar01498435 | |||||||||
WBVar00227733 | |||||||||
WBVar00227734 | |||||||||
WBVar00268902 | |||||||||
WBVar00373688 | |||||||||
WBVar00373689 | |||||||||
WBVar00373690 | |||||||||
WBVar01499017 | |||||||||
WBVar00754982 | |||||||||
WBVar00754983 | |||||||||
WBVar00754984 | |||||||||
WBVar00754985 | |||||||||
WBVar00754986 | |||||||||
WBVar01784338 | |||||||||
WBVar00754987 | |||||||||
WBVar00754988 | |||||||||
WBVar00754989 | |||||||||
WBVar00754990 | |||||||||
WBVar00754991 | |||||||||
WBVar00754992 | |||||||||
WBVar00754993 | |||||||||
WBVar00754994 | |||||||||
WBVar00754995 | |||||||||
WBVar00754996 | |||||||||
WBVar02130460 | |||||||||
WBVar00754997 | |||||||||
WBVar00754998 | |||||||||
WBVar01473746 | |||||||||
WBVar01243055 | |||||||||
WBVar01243056 | |||||||||
WBVar00092988 | |||||||||
WBVar01498940 | |||||||||
Strain | WBStrain00036519 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00078329 | ||||||||
Ortholog (24) | |||||||||
Paralog (26) | |||||||||
Structured_description | Concise_description | The protein product of abu-14 is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain; abu-14 is transcriptionally up-regulated during times of cuticle synthesis, such as in late embryogenesis and in the molts; it is localized to the pharyngeal cuticle and is required for the function of the pharyngeal grinder. | Paper_evidence | WBPaper00005068 | |||||
WBPaper00012788 | |||||||||
WBPaper00012830 | |||||||||
WBPaper00012882 | |||||||||
WBPaper00012897 | |||||||||
WBPaper00013003 | |||||||||
WBPaper00045960 | |||||||||
Person_evidence | WBPerson507 | ||||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 13 Jul 2015 00:00:00 | ||||||||
Automated_description | Involved in pharynx development. Expressed in buccal cavity; cuticle; grinder; marginal cell; and pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK1067.7 | |||||||
Corresponding_CDS_history | ZK1067.7:wp158 | ||||||||
Corresponding_transcript | ZK1067.7.1 | ||||||||
Other_sequence | CJC14610_1 | ||||||||
FG620557.1 | |||||||||
Oden_isotig27569 | |||||||||
FG620566.1 | |||||||||
Dviv_isotig24030 | |||||||||
Associated_feature (13) | |||||||||
Experimental_info | RNAi_result (13) | ||||||||
Expr_pattern | Expr3431 | ||||||||
Expr12489 | |||||||||
Expr1024777 | |||||||||
Expr1032036 | |||||||||
Expr1162525 | |||||||||
Expr2009107 | |||||||||
Expr2027343 | |||||||||
Drives_construct | WBCnstr00011397 | ||||||||
WBCnstr00021466 | |||||||||
WBCnstr00037931 | |||||||||
Construct_product | WBCnstr00021466 | ||||||||
WBCnstr00037931 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (282) | |||||||||
Interaction (204) | |||||||||
Map_info | Map | II | Position | 1.09512 | Error | 0.000238 | |||
Positive | Positive_clone | ZK1067 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00026929 | ||||||||
WBPaper00038304 | |||||||||
WBPaper00045960 | |||||||||
WBPaper00052304 | |||||||||
WBPaper00064306 | |||||||||
WBPaper00064648 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |