WormBase Tree Display for Gene: WBGene00001620
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| WBGene00001620 | SMap | S_parent | Sequence | C12D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | glt-1 | |||||||
| Sequence_name | C12D12.2 | ||||||||
| Molecular_name | C12D12.2a | ||||||||
| C12D12.2a.1 | |||||||||
| CE29083 | |||||||||
| C12D12.2b | |||||||||
| CE29084 | |||||||||
| C12D12.2b.1 | |||||||||
| Other_name | Ceglut-2 | Accession_evidence | EMBL | D86740 | |||||
| CeGlt-2 | Accession_evidence | EMBL | U35250 | ||||||
| CeGlt-1 | CGC_data_submission | ||||||||
| glt-2 | CGC_data_submission | ||||||||
| CELE_C12D12.2 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | glt-1 | ||||||||
| DB_info | Database | AceView | gene | XE117 | |||||
| WormQTL | gene | WBGene00001620 | |||||||
| WormFlux | gene | WBGene00001620 | |||||||
| NDB | locus_tag | CELE_C12D12.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001620|UniProtKB=Q10901 | |||||||
| family | PTHR11958 | ||||||||
| NCBI | gene | 180641 | |||||||
| RefSeq | protein | NM_001029223.6 | |||||||
| NM_001029222.4 | |||||||||
| SwissProt | UniProtAcc | Q10901 | |||||||
| UniProt_GCRP | UniProtAcc | Q10901 | |||||||
| OMIM | gene | 600300 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glt | ||||||||
| Allele | WBVar00091515 | Inferred_automatically | From strain object: OS11091 | ||||||
| From strain object: ZB1106 | |||||||||
| WBVar02005239 | |||||||||
| WBVar01830091 | |||||||||
| WBVar00077131 | |||||||||
| WBVar00499201 | |||||||||
| WBVar00499202 | |||||||||
| WBVar00499203 | |||||||||
| WBVar00499204 | |||||||||
| WBVar00499205 | |||||||||
| WBVar00499206 | |||||||||
| WBVar00499207 | |||||||||
| WBVar01814058 | |||||||||
| WBVar00499208 | |||||||||
| WBVar00499209 | |||||||||
| WBVar00499210 | |||||||||
| WBVar00499211 | |||||||||
| WBVar02147961 | |||||||||
| WBVar01499636 | |||||||||
| WBVar01134194 | |||||||||
| WBVar01134195 | |||||||||
| WBVar01134196 | |||||||||
| WBVar01134197 | |||||||||
| WBVar01134198 | |||||||||
| WBVar01134199 | |||||||||
| WBVar01134200 | |||||||||
| WBVar01134201 | |||||||||
| WBVar01134202 | |||||||||
| WBVar01134203 | |||||||||
| WBVar01134204 | |||||||||
| WBVar01134205 | |||||||||
| WBVar01134206 | |||||||||
| WBVar01134207 | |||||||||
| WBVar01134208 | |||||||||
| WBVar01134209 | |||||||||
| WBVar01134210 | |||||||||
| WBVar01134211 | |||||||||
| WBVar01134212 | |||||||||
| WBVar01134213 | |||||||||
| WBVar01134214 | |||||||||
| WBVar01134215 | |||||||||
| WBVar02139025 | |||||||||
| WBVar01500067 | |||||||||
| Strain | WBStrain00040793 | ||||||||
| WBStrain00047426 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00001621 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001625 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001624 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001623 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001622 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | glt-1 encodes a predicted plasma membrane glutamate transporter that is functional when expressed in Xenopus oocytes; expressed in the M3 pharyngeal neuron, the male tail, some anterior hypodermal cells, and in cells in the terminal bulb of the pharynx. | Paper_evidence | WBPaper00002546 | |||||
| WBPaper00002806 | |||||||||
| WBPaper00003537 | |||||||||
| WBPaper00004458 | |||||||||
| WBPaper00010915 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 25 Apr 2005 00:00:00 | ||||||||
| Automated_description | Enables L-glutamate transmembrane transporter activity. Predicted to be involved in L-glutamate transmembrane transport. Located in cell projection. Expressed in body wall musculature; cephalic sheath cell; hypodermis; and muscle cell. Human ortholog(s) of this gene implicated in Huntington's disease; amyotrophic lateral sclerosis; and developmental and epileptic encephalopathy 41. Is an ortholog of human SLC1A2 (solute carrier family 1 member 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:332 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10940) | ||||
| DOID:12858 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10940) | ||||||
| DOID:0080442 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10940) | ||||||
| Molecular_info | Corresponding_CDS | C12D12.2a | |||||||
| C12D12.2b | |||||||||
| Corresponding_transcript | C12D12.2a.1 | ||||||||
| C12D12.2b.1 | |||||||||
| Other_sequence (69) | |||||||||
| Associated_feature | WBsf718546 | ||||||||
| WBsf1004642 | |||||||||
| WBsf1004643 | |||||||||
| WBsf235489 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010636 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00027701 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040376 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4787 | ||||||||
| Expr14560 | |||||||||
| Expr1012956 | |||||||||
| Expr1030972 | |||||||||
| Expr1144438 | |||||||||
| Expr2012126 | |||||||||
| Expr2030362 | |||||||||
| Drives_construct (4) | |||||||||
| Construct_product | WBCnstr00012244 | ||||||||
| WBCnstr00036819 | |||||||||
| Antibody | WBAntibody00001533 | ||||||||
| WBAntibody00001534 | |||||||||
| WBAntibody00002630 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (191) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | X | Position | -10.2673 | Error | 0.012682 | |||
| Positive | Positive_clone | B0015 | |||||||
| C12D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Mapping_data | Multi_point | 4357 | |||||||
| 4758 | |||||||||
| Reference (14) | |||||||||
| Remark (2) | |||||||||
| Method | Gene |
