WormBase Tree Display for Gene: WBGene00001489

WBGene00001489 SMap: S_parent: Sequence: T04C9
  Identity: Version: 1
    Name: CGC_name: frm-2 Person_evidence: WBPerson204
      Sequence_name: T04C9.6
      Molecular_name: T04C9.6a
        T04C9.6a.1
        CE29463
        T04C9.6b
        CE39274
        T04C9.6a.2
        T04C9.6a.3
        T04C9.6a.4
        T04C9.6b.1
      Other_name: CELE_T04C9.6 Accession_evidence: NDB BX284603
      Public_name: frm-2
    DB_info: Database: WormQTL gene WBGene00001489
        WormFlux gene WBGene00001489
        NDB locus_tag CELE_T04C9.6
        Panther gene CAEEL|WormBase=WBGene00001489|UniProtKB=H2KZV9
          family PTHR23280
        NCBI gene 175848
        RefSeq protein NM_001392115.1
            NM_001047405.6
        TREEFAM TREEFAM_ID TF319780
        TrEMBL UniProtAcc H2KZV9
            Q9GP93
        UniProt_GCRP UniProtAcc H2KZV9
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: frm
    Allele: WBVar02157724
      WBVar01500260
      WBVar01489409
      WBVar01445981
      WBVar00056875
      WBVar00056880
      WBVar01722546
      WBVar01722547
      WBVar01722548
      WBVar01494599
      WBVar02152214
      WBVar01500122
      WBVar01500123
      WBVar02132094
      WBVar00830850
      WBVar01264144
      WBVar00830851
      WBVar01264145
      WBVar00830852
      WBVar00830853
      WBVar01264147
      WBVar00830854
      WBVar00830855
      WBVar00830856
      WBVar00830857
      WBVar00830858
      WBVar00830859
      WBVar00830860
      WBVar00830861
      WBVar00830862
      WBVar00830863
      WBVar00830864
      WBVar01999633
      WBVar00830865
      WBVar00830866
      WBVar00830867
      WBVar00830868
      WBVar00830869
      WBVar00830870
      WBVar00830871
      WBVar00830872
      WBVar00830873
      WBVar00830874
      WBVar00830875
      WBVar00830876
      WBVar00830877
      WBVar00830878
      WBVar00830879
      WBVar00830880
      WBVar00830881
      WBVar00830882
      WBVar00262898
      WBVar01656767
      WBVar01541766
      WBVar00399004
      WBVar00399005
      WBVar00399006
      WBVar00399007
      WBVar00399008
      WBVar00399009
      WBVar00399010
      WBVar00399011
      WBVar00399012
      WBVar00269781
      WBVar00399013
      WBVar00399014
      WBVar00399015
      WBVar00399016
      WBVar02151587
      WBVar00399017
      WBVar00399018
      WBVar00399019
      WBVar01952210
      WBVar01628569
      WBVar01628570
      WBVar01644913
    Strain: WBStrain00052074
    RNASeq_FPKM (74)
    GO_annotation: 00022587
      00022588
      00022589
      00108785
    Ortholog (40)
    Paralog: WBGene00001488 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00001491 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00001333 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable cytoskeletal protein binding activity. Predicted to be involved in actomyosin structure organization. Predicted to be located in cytoskeleton. Expressed in intestinal cell; pharyngeal epithelial cell; and sensory neurons. Is an ortholog of human EPB41L4B (erythrocyte membrane protein band 4.1 like 4B) and EPB41L5 (erythrocyte membrane protein band 4.1 like 5). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T04C9.6a
      T04C9.6b
    Corresponding_CDS_history: T04C9.6:wp150
    Corresponding_transcript: T04C9.6a.1
      T04C9.6a.2
      T04C9.6a.3
      T04C9.6a.4
      T04C9.6b.1
    Other_sequence (18)
    Associated_feature (17)
  Experimental_info: RNAi_result: WBRNAi00052383 Inferred_automatically: RNAi_primary
      WBRNAi00035134 Inferred_automatically: RNAi_primary
      WBRNAi00052384 Inferred_automatically: RNAi_primary
      WBRNAi00114827 Inferred_automatically: RNAi_primary
      WBRNAi00018140 Inferred_automatically: RNAi_primary
      WBRNAi00005371 Inferred_automatically: RNAi_primary
      WBRNAi00077328 Inferred_automatically: RNAi_primary
      WBRNAi00006806 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr6604
      Expr14776
      Expr14777
      Expr1023863
      Expr1030890
      Expr1156009
      Expr2011884
      Expr2030122
    Drives_construct: WBCnstr00004165
      WBCnstr00036914
      WBCnstr00041421
    Construct_product: WBCnstr00036914
      WBCnstr00041421
    Microarray_results (26)
    Expression_cluster (174)
    Interaction: WBInteraction000187468
      WBInteraction000311454
      WBInteraction000314756
      WBInteraction000450671
      WBInteraction000543750
      WBInteraction000543751
      WBInteraction000543752
      WBInteraction000543753
      WBInteraction000543754
      WBInteraction000556612
  Map_info: Map: III Position: -1.42755 Error: 9.2e-05
    Positive: Positive_clone: T04C9 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (5)
  Remark: data submitted by [Gobel V]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene