WormBase Tree Display for Gene: WBGene00003785

WBGene00003785 SMap: S_parent: Sequence: Y53C12B
  Identity: Version: 1
    Name: CGC_name: nos-3 Person_evidence: WBPerson575
      Sequence_name: Y53C12B.3
      Molecular_name (15)
      Other_name: syt-1
        pqn-86
        Nanos Paper_evidence: WBPaper00053101
        CELE_Y53C12B.3 Accession_evidence: NDB BX284602
      Public_name: nos-3
    DB_info: Database: AceView gene 2K39
        WormQTL gene WBGene00003785
        WormFlux gene WBGene00003785
        NDB locus_tag CELE_Y53C12B.3
        NCBI gene 174535
        RefSeq protein NM_001393164.1
            NM_001393165.1
            NM_063700.4
            NM_001395805.1
            NM_063701.5
        TREEFAM TREEFAM_ID TF350042
        TrEMBL UniProtAcc A0A7R9XN27
            O62486
            O18218
            A0A7R9XLP7
            A0A7R9XMZ3
        UniProt_GCRP UniProtAcc A0A7R9XMZ3
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:33 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nos
    Allele: WBVar00241167 Inferred_automatically: From strain object: JK2589
          From strain object: JK3182
      WBVar01499702
      WBVar00758225
      WBVar00758226
      WBVar00758227
      WBVar00758228
      WBVar00758229
      WBVar00758230
      WBVar00758231
      WBVar00758232
      WBVar00758233
      WBVar00758234
      WBVar00758235
      WBVar00758236
      WBVar00758237
      WBVar00758238
      WBVar00758239
      WBVar00758240
      WBVar00758241
      WBVar00758242
      WBVar00758243
      WBVar00758244
      WBVar00758245
      WBVar00758246
      WBVar01498435
      WBVar00758247
      WBVar00758248
      WBVar00758249
      WBVar00758250
      WBVar00758251
      WBVar00758252
      WBVar00758253
      WBVar00758254
      WBVar00758255
      WBVar00758256
      WBVar00758257
      WBVar00758258
      WBVar01413791
      WBVar00095096
      WBVar00095097
      WBVar00095098
      WBVar01499017
      WBVar00095100
      WBVar00095101
      WBVar02040375
      WBVar02040376
      WBVar02040377
      WBVar01492235
      WBVar01499234
      WBVar01696206
      WBVar01309970
      WBVar01309971
      WBVar01488944
      WBVar01309974
      WBVar01309975
      WBVar01309976
      WBVar01309977
      WBVar01309978
      WBVar01309979
      WBVar00228102
      WBVar01627051
      WBVar00374714
      WBVar00374715
      WBVar01439195
      WBVar00374716
      WBVar00374717
      WBVar00374718
      WBVar00374719
      WBVar00374720
      WBVar00374721
      WBVar00374722
      WBVar00374723
      WBVar01498940
      WBVar00374724
      WBVar00374725
      WBVar00374726
      WBVar02130534
      WBVar01243446
      WBVar01243447
      WBVar01243448
      WBVar01243449
      WBVar01243450
    Strain: WBStrain00022580
      WBStrain00022615
      WBStrain00054810
    RNASeq_FPKM (74)
    GO_annotation: 00031725
      00031726
      00031727
      00031728
      00031729
      00031730
      00031731
      00037989
    Ortholog (20)
    Structured_description: Concise_description: nos-3 encodes a homolog of Drosophila NANOS that physically interacts with FBF-1 (similar, though not orthologous, to Drosophila PUMILIO); NOS-3 is required in development of the hermaphrodite germ-line to promote the switch from sperm to oocyte production, perhaps by forming a complex with FBF-1 that controls fem-3 mRNA. Paper_evidence: WBPaper00003692
            WBPaper00005068
            WBPaper00012788
            WBPaper00012830
            WBPaper00012882
            WBPaper00012897
            WBPaper00013003
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable RNA binding activity. Involved in positive regulation of meiotic nuclear division. Located in cytoplasm. Expressed in several structures, including Psub3; Psub4; Z2; Z3; and germ line. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y53C12B.3a
      Y53C12B.3b
      Y53C12B.3c
      Y53C12B.3d
      Y53C12B.3e
    Corresponding_transcript: Y53C12B.3a.1
      Y53C12B.3b.1
      Y53C12B.3c.1
      Y53C12B.3d.1
      Y53C12B.3e.1
    Other_sequence: CR00137
      CRC05300_1
      CR00136
      MC05328
      CR08429
    Associated_feature (11)
  Experimental_info: RNAi_result (13)
    Expr_pattern: Expr1202
      Expr1203
      Expr1011795
      Expr1031771
      Expr1160694
      Expr2014358
      Expr2032599
    Drives_construct: WBCnstr00008698
      WBCnstr00008699
      WBCnstr00008700
      WBCnstr00035868
    Construct_product: WBCnstr00005242
      WBCnstr00008698
      WBCnstr00008699
      WBCnstr00008700
      WBCnstr00035868
    Antibody: WBAntibody00000240
    Microarray_results (42)
    Expression_cluster (117)
    Interaction (122)
  Map_info: Map: II Position: 1.70862 Error: 0.00125
    Positive: Positive_clone: Y53C12B Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4543
        5522
    Pseudo_map_position
  Reference: WBPaper00003692
    WBPaper00003762
    WBPaper00004256
    WBPaper00004549
    WBPaper00005338
    WBPaper00006073
    WBPaper00006101
    WBPaper00006369
    WBPaper00006404
    WBPaper00006491
    WBPaper00012342
    WBPaper00012436
    WBPaper00012443
    WBPaper00018262
    WBPaper00018394
    WBPaper00018718
    WBPaper00018890
    WBPaper00018891
    WBPaper00023240
    WBPaper00024263
    WBPaper00024787
    WBPaper00025000
    WBPaper00025264
    WBPaper00026545
    WBPaper00026645
    WBPaper00026961
    WBPaper00027224
    WBPaper00027248
    WBPaper00027261
    WBPaper00027268
    WBPaper00027294
    WBPaper00027310
    WBPaper00027374
    WBPaper00027724
    WBPaper00027803
    WBPaper00027842
    WBPaper00028032
    WBPaper00029255
    WBPaper00031905
    WBPaper00032055
    WBPaper00032220
    WBPaper00032496
    WBPaper00033123
    WBPaper00033153
    WBPaper00033205
    WBPaper00034378
    WBPaper00034537
    WBPaper00034865
    WBPaper00036244
    WBPaper00036705
    WBPaper00036884
    WBPaper00036942
    WBPaper00038112
    WBPaper00038281
    WBPaper00038411
    WBPaper00038448
    WBPaper00038491
    WBPaper00040600
    WBPaper00043624
    WBPaper00046425
    WBPaper00048212
    WBPaper00053101
    WBPaper00057161
    WBPaper00061187
    WBPaper00065284
  Picture: WBPicture0000013095
  Remark: Sequence connection from [Kraemer B, Kimble JE, Wickens MP]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene