WormBase Tree Display for Gene: WBGene00018948
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| WBGene00018948 | SMap | S_parent | Sequence | F56C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F56C9.3 | |||||||
| Molecular_name | F56C9.3 | ||||||||
| F56C9.3.1 | |||||||||
| CE29406 | |||||||||
| F56C9.3.2 | |||||||||
| Other_name | F56C9.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| F56C9.h | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F56C9.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | F56C9.3 | ||||||||
| DB_info | Database | AceView | gene | 3I401 | |||||
| WormQTL | gene | WBGene00018948 | |||||||
| WormFlux | gene | WBGene00018948 | |||||||
| NDB | locus_tag | CELE_F56C9.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018948|UniProtKB=Q20864 | |||||||
| family | PTHR43840 | ||||||||
| NCBI | gene | 176036 | |||||||
| RefSeq | protein | NM_066210.7 | |||||||
| TREEFAM | TREEFAM_ID | TF317380 | |||||||
| TrEMBL | UniProtAcc | Q20864 | |||||||
| UniProt_GCRP | UniProtAcc | Q20864 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01500260 | ||||||||
| WBVar00233781 | |||||||||
| WBVar00563831 | |||||||||
| WBVar00059965 | |||||||||
| WBVar00059970 | |||||||||
| WBVar02156348 | |||||||||
| WBVar00276740 | |||||||||
| WBVar01499774 | |||||||||
| WBVar01645410 | |||||||||
| WBVar00838597 | |||||||||
| WBVar01645411 | |||||||||
| WBVar00838598 | |||||||||
| WBVar00838599 | |||||||||
| WBVar00838600 | |||||||||
| WBVar00838601 | |||||||||
| WBVar00838602 | |||||||||
| WBVar00838603 | |||||||||
| WBVar00838604 | |||||||||
| WBVar00838605 | |||||||||
| WBVar00838606 | |||||||||
| WBVar00838607 | |||||||||
| WBVar01330636 | |||||||||
| WBVar01330637 | |||||||||
| WBVar01939175 | |||||||||
| WBVar01893597 | |||||||||
| WBVar02095930 | |||||||||
| WBVar00401421 | |||||||||
| WBVar00401422 | |||||||||
| WBVar00401423 | |||||||||
| WBVar00401424 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069399 | ||||||||
| 00069400 | |||||||||
| 00069401 | |||||||||
| 00069402 | |||||||||
| 00069403 | |||||||||
| 00069404 | |||||||||
| 00123911 | |||||||||
| 00123912 | |||||||||
| 00123913 | |||||||||
| 00123914 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00010644 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018280 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00019841 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044481 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019803 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000393 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006590 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00011821 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012712 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013668 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable monoatomic cation transmembrane transporter activity. Predicted to be involved in monoatomic cation transmembrane transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56C9.3 | |||||||
| Corresponding_transcript | F56C9.3.1 | ||||||||
| F56C9.3.2 | |||||||||
| Other_sequence (22) | |||||||||
| Associated_feature | WBsf225234 | ||||||||
| WBsf225235 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00090615 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048672 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048678 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000429 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005964 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048673 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015801 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032947 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005522 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008078 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067176 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015804 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015568 | ||||||||
| Expr1038172 | |||||||||
| Expr1152434 | |||||||||
| Expr2004286 | |||||||||
| Expr2022510 | |||||||||
| Drives_construct | WBCnstr00026172 | ||||||||
| Construct_product | WBCnstr00026172 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (144) | |||||||||
| Interaction (284) | |||||||||
| Map_info | Positive | Positive_clone | F56C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.753881 | |||||||
| Reference | WBPaper00026592 | ||||||||
| Method | Gene |
