WormBase Tree Display for Gene: WBGene00009664

WBGene00009664 SMap: S_parent: Sequence: F43G9
  Identity: Version: 2
    Name: CGC_name: idha-1 Person_evidence: WBPerson1983
            WBPerson261
      Sequence_name: F43G9.1
      Molecular_name: F43G9.1
        F43G9.1.1
        CE34018
      Other_name: CELE_F43G9.1 Accession_evidence: NDB BX284601
      Public_name: idha-1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 08 Dec 2011 12:14:43 WBPerson2970 Name_change: CGC_name: idha-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: idha
    Allele: WBVar01491795
      WBVar00656169
      WBVar00656170
      WBVar00656171
      WBVar00656172
      WBVar00656173
      WBVar00656174
      WBVar00656175
      WBVar00656176
      WBVar00656177
      WBVar00656178
      WBVar00656179
      WBVar00656180
      WBVar00656181
      WBVar00656182
      WBVar00656183
      WBVar00656184
      WBVar01500105
      WBVar01499739
      WBVar01422224
      WBVar01499402
      WBVar01499786
      WBVar01499054
      WBVar00340433
      WBVar00340434
      WBVar00155199
      WBVar01498959
    Strain: WBStrain00002656
      WBStrain00001311
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (41)
    Paralog: WBGene00007993 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009440 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016266 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: F43G9.1 encodes the C. elegans homolog of the alpha subunit of an NAD+-dependent mitochondrial isocitrate dehydrogenase; by homology, the product of F43G9.1 is predicted to catalyze the formation of alpha-ketoglutarate from isocitrate as part of the citric acid cycle. Curator_confirmed: WBPerson1843
          Date_last_updated: 26 Oct 2011 00:00:00
      Automated_description: Predicted to enable isocitrate dehydrogenase (NAD+) activity. Involved in protein folding. Located in mitochondrion. Expressed in head and tail. Human ortholog(s) of this gene implicated in retinitis pigmentosa 90. Is an ortholog of human IDH3A (isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0112147 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5384)
  Molecular_info: Corresponding_CDS: F43G9.1
    Corresponding_CDS_history: F43G9.1:wp101
    Corresponding_transcript: F43G9.1.1
    Other_sequence: EX012777.1
      GR19464
      CR02168
      Tcol_isotig00806
      Tcol_isotig25898
      CBC00524_1
      HG02217
      HBC23160_1
      ACC28647_1
      SSC02261_1
      EX008841.1
      Acan_isotig11032
      FC543227.1
      ES567219.1
      PPC09057_1
      TDC03341_1
      PT00488
      Tcol_isotig00805
      Oden_isotig11389
      Dviv_isotig14401
      GRC05196_1
      EX012033.1
      TS00155
      HBC00958_1
      Dviv_isotig14399
      EX010487.1
      GW409011.1
      GR19465
      BXC00479_1
      Oden_isotig11386
      EX500489.1
      HC03737
      ES563790.1
      EX012123.1
      EY470927.1
      SRC00150_1
      CR09730
      JI167400.1
      HGC00097_1
      Acan_isotig08692
      FC553992.1
      ES564395.1
      ES410769.1
      GW410868.1
      CR09841
      TS03441
      HG07930
      Dviv_isotig14400
      TSC04486_1
      Oden_isotig29345
      GP03282
      EX553553.1
      SSC05687_1
      GRC05448_1
      HS01138
      HCC02084_1
      CRC01987_1
      ACC09677_1
      EY472053.1
      SS01858
      ES561139.1
      SS02956
      Oden_isotig11387
      Tcir_isotig26617
      EX567186.1
      PPC02782_1
      TSC02433_1
      HBC12823_1
      OOC02206_1
      PTC02678_1
      CBC14619_1
      FC547641.1
      Hbac_isotig01312
      EX008354.1
      Oden_isotig11388
      GPC02598_1
      AM743914.1
      HC01222
      CRC12235_1
      HCC00560_1
      PSC03129_1
      SR01227
      EX912644.1
      HSC01481_1
      ES566918.1
    Associated_feature: WBsf649400
      WBsf984466
      WBsf984467
      WBsf219948
      WBsf219949
      WBsf219950
      WBsf219951
  Experimental_info: RNAi_result (16)
    Expr_pattern: Chronogram58
      Chronogram1615
      Expr6062
      Expr6063
      Expr1022195
      Expr1034222
      Expr1151075
      Expr2012671
      Expr2030907
    Drives_construct: WBCnstr00002204
      WBCnstr00004253
      WBCnstr00032013
    Construct_product: WBCnstr00032013
    Microarray_results (23)
    Expression_cluster (126)
    Interaction (226)
  Map_info: Map: I Position: 2.9924
    Positive: Positive_clone: F43G9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (14)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene