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WormBase Tree Display for Gene: WBGene00000216

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Name Class

WBGene00000216EvidenceCGC_data_submission
SMapS_parentSequenceH22K11
IdentityVersion1
NameCGC_nameasp-3Person_evidenceWBPerson184
Sequence_nameH22K11.1
Molecular_nameH22K11.1
H22K11.1.1
CE47856
Other_nameCELE_H22K11.1Accession_evidenceNDBBX284606
Public_nameasp-3
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classasp
AlleleWBVar01498964
WBVar01469480
WBVar01469481
WBVar01496444
WBVar00506919
WBVar00506920
WBVar00506921
WBVar00506922
WBVar00506923
WBVar00506924
WBVar01820157
WBVar01156651
WBVar01156652
WBVar01156653
WBVar01156654
WBVar01156655
WBVar01156656
WBVar01156657
WBVar01156658
WBVar01156659
WBVar01156660
WBVar01156661
WBVar01156662
WBVar01156663
WBVar01156664
WBVar01881926
WBVar01156665
WBVar01881927
WBVar01156666
WBVar00276815
WBVar01848944
WBVar01474049
WBVar01474050
WBVar01498588
WBVar01500067
StrainWBStrain00051696
WBStrain00055639
RNASeq_FPKM (74)
GO_annotation (20)
Ortholog (36)
Paralog (17)
Structured_descriptionConcise_descriptionasp-3 encodes an aspartyl protease homolog that is required, in parallel with ASP-4 but downstream of CLP-1 and TRA-3, for degenerative (necrotic-like) cell death in neurons induced by mutations such as mec-4(d), deg-3(d), or gsa-1(gf).Paper_evidenceWBPaper00005513
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable aspartic-type endopeptidase activity. Involved in programmed necrotic cell death. Located in lysosome. Expressed in intestine and uterus. Is an ortholog of human NAPSA (napsin A aspartic peptidase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSH22K11.1
Corresponding_transcriptH22K11.1.1
Other_sequenceEX012714.1
CSC00828_1
FC813928.1
AM743640.1
PT01105
EG025567.1
TDC02796_1
EX007813.1
PSC00011_2
ES411440.1
EX009021.1
FD517315.1
HBC00509_1
FD517724.1
FD515865.1
JI181411.1
CBC00140_1
HC03450
GW406772.1
AS00866
FC814497.1
HC02514
FG975323.1
FG975554.1
JI466774.1
HBC04899_1
FC814775.1
ASC04574_1
PSC01880_1
FD516871.1
FF679582.1
ES412717.1
EW743000.1
HCC00236_1
Tcir_isotig06466
HC01897
EX916392.1
FG978678.1
AS09335
HBC00123_1
AJ309528.1
GW411591.1
CBC12527_1
OFC00673_1
EX911257.1
HC01353
HC09050
OF00263
FG971314.1
ES742536.1
AS09264
FG979167.1
MC02160
ES743828.1
ES413932.1
EX012195.1
CR02665
Tcir_isotig17486
CJC09376_1
PP00373
CJC08439_1
PSC00011_1
FD517089.1
FF680048.1
EX011994.1
HBC23316_1
FG973855.1
Acan_isotig11984
FD515390.1
FD515699.1
AS06389
ES568680.1
SRC00318_1
FG974634.1
FD515050.1
MCC02595_1
HC00326
FC818745.1
ES744635.1
Tcir_isotig25016
HCC01789_1
PTC00425_1
ES742563.1
FG978837.1
FF679581.1
BXC05775_1
CJC17545_1
FG971191.1
Tcir_isotig02739
Tcir_isotig22514
FD516292.1
HC04939
GW412312.1
EX010088.1
FF680251.1
PPC11586_1
TS00566
ES411254.1
FD517326.1
HCC09631_1
FC813029.1
FD514127.1
ES739413.1
FF680373.1
GW412322.1
SR00486
Tcir_isotig31444
FG973693.1
ES739568.1
EX914491.1
SR00889
EX007837.1
Tcir_isotig06178
FF680005.1
FD516307.1
HCC06670_1
HC05205
FC817299.1
ES411019.1
ES739152.1
AS00709
GO252768.1
HCC11559_1
OF00262
ES409965.1
FC811726.1
ES740576.1
FG974641.1
EX911684.1
ES412191.1
HCC11345_1
Hbac_isotig00037
FG978176.1
ES412419.1
CJC08040_1
FC814992.1
HCC13223_1
EX011491.1
FG978937.1
CRC08729_1
FG974291.1
CJC00770_1
EW744180.1
GW408756.1
HC04550
DA00217
ES741664.1
EX015246.1
ES570295.1
HC00547
GW412292.1
FD516878.1
HBC16052_1
HC04305
FD515722.1
HC01569
FF681041.1
HBC13363_1
HC01666
CRC01071_1
FG981160.1
EX916202.1
HC09406
FF681573.1
XIC02523_1
Tcir_isotig02738
EX009837.1
FD517454.1
FC809673.1
EL784470.1
EX010831.1
AJ309529.1
DW718324.1
AS00943
HCC02518_1
FG980830.1
Tcol_isotig16581
FC819328.1
HBC03240_1
Tcir_isotig26559
AJ299415.1
TS03361
ES739108.1
FF681336.1
Tcir_isotig18588
FJ756442.1
ES743793.1
ES410832.1
ES743493.1
FF679345.1
EX008528.1
EX913524.1
HC02512
FC817138.1
FD514371.1
ACC19289_1
FG971908.1
FG586960.1
FC819873.1
HCC11233_1
PSC00011_3
HC01204
ES743988.1
SRC00318_2
ES410558.1
ES408832.1
FF681228.1
HCC10750_1
FC814834.1
XI03120
Tcir_isotig09258
ES408608.1
FD516659.1
PPC00081_1
Tcir_isotig27126
Tcir_isotig06883
FD515377.1
Tcir_isotig05383
EX009173.1
ACC17075_1
FG979243.1
FF680476.1
Oden_isotig24948
CSC00182_1
HCC12608_1
CBC15618_1
FC809536.1
FF680271.1
EX011172.1
Associated_featureWBsf662316
WBsf662911
WBsf982190
WBsf1005643
WBsf1005644
WBsf1023141
WBsf235869
WBsf235870
WBsf235871
Experimental_infoRNAi_result (20)
Expr_patternExpr2132
Expr1020339
Expr1030133
Expr1153183
Expr2009467
Expr2027705
Drives_constructWBCnstr00037656
Construct_productWBCnstr00037656
AntibodyWBAntibody00002873
Microarray_results (25)
Expression_cluster (245)
Interaction (131)
Map_infoMapXPosition-2.42178Error0.004086
PositivePositive_cloneH22K11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (29)
RemarkSequence connection from [Freedman J]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene