WormBase Tree Display for Gene: WBGene00015916

WBGene00015916 SMap: S_parent: Sequence: C17G10
  Identity: Version: 2
    Name: CGC_name: ttc-4 Person_evidence: WBPerson3828
      Sequence_name: C17G10.2
      Molecular_name: C17G10.2
        C17G10.2.1
        CE29583
      Other_name: CELE_C17G10.2 Accession_evidence: NDB BX284602
      Public_name: ttc-4
    DB_info: Database: AceView gene 2F885
        WormQTL gene WBGene00015916
        WormFlux gene WBGene00015916
        NDB locus_tag CELE_C17G10.2
        Panther gene CAEEL|WormBase=WBGene00015916|UniProtKB=Q09974
          family PTHR46035
        NCBI gene 173946
        RefSeq protein NM_062686.6
        TREEFAM TREEFAM_ID TF314657
        TrEMBL UniProtAcc Q09974
        UniProt_GCRP UniProtAcc Q09974
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 05 Sep 2017 13:25:30 WBPerson2970 Name_change: CGC_name: ttc-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttc
    Allele: WBVar00732966
      WBVar00732967
      WBVar01499702
      WBVar00732968
      WBVar00732969
      WBVar00732970
      WBVar00732971
      WBVar00732972
      WBVar00732973
      WBVar00732974
      WBVar00732975
      WBVar00732976
      WBVar00732977
      WBVar00732978
      WBVar00732979
      WBVar01306132
      WBVar01306133
      WBVar01498435
      WBVar00366496
      WBVar00366497
      WBVar01603892
      WBVar02012093
      WBVar00531878
    Strain: WBStrain00001385
      WBStrain00037712
      WBStrain00034978
    RNASeq_FPKM (74)
    GO_annotation: 00055567
      00055568
      00055569
      00055570
      00121644
    Contained_in_operon: CEOP2192
    Ortholog: WBGene00025500 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00057325 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00139373 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00137549 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00153413 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222534 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g12578 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2462 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5459 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1548 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12292 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11851 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11300 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21453 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9195 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7101 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-C17G10.2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g11365 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00331.g9555 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_006075 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02594 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g6488 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20110710 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4553 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248123 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00273592 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00262260 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00290896 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000000359 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      FB:FBgn0266518 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1021 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:12394 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1919604 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1308529 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00000500 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006781 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016375 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019893 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019983 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable Hsp70 protein binding activity and Hsp90 protein binding activity. Predicted to be involved in protein folding. Predicted to be located in nucleus. Expressed in head. Is an ortholog of human TTC4 (tetratricopeptide repeat domain 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C17G10.2
    Corresponding_transcript: C17G10.2.1
    Other_sequence (30)
    Associated_feature: WBsf644213
      WBsf221305
  Experimental_info: RNAi_result (17)
    Expr_pattern: Chronogram1085
      Chronogram1106
      Expr5289
      Expr5290
      Expr1024844
      Expr1036805
      Expr1144881
      Expr1200262
      Expr2000927
      Expr2019148
    Drives_construct: WBCnstr00002276
      WBCnstr00004284
      WBCnstr00028458
    Construct_product: WBCnstr00028458
    Microarray_results (21)
    Expression_cluster (111)
    Interaction (85)
  Map_info: Map: II Position: -1.06522
    Positive: Positive_clone: C17G10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00040294
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene