WormBase Tree Display for Gene: WBGene00015745

WBGene00015745 SMap: S_parent: Sequence: C13F10
  Identity: Version: 2
    Name: Sequence_name: C13F10.6
      Molecular_name: C13F10.6
        C13F10.6.1
        CE08147
      Other_name: CELE_C13F10.6 Accession_evidence: NDB BX284605
      Public_name: C13F10.6
    DB_info: Database: AceView gene 5H700
        WormQTL gene WBGene00015745
        WormFlux gene WBGene00015745
        NDB locus_tag CELE_C13F10.6
        NCBI gene 182579
        RefSeq protein NM_072429.4
        TREEFAM TREEFAM_ID TF318226
        TrEMBL UniProtAcc O01487
        UniProt_GCRP UniProtAcc O01487
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 02 Mar 2018 10:40:20 WBPerson4025 Event: Split_into: WBGene00303039
      Split_into: WBGene00303039
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00211199
      WBVar00211200
      WBVar01499740
      WBVar01500129
      WBVar00256056
      WBVar01499056
      WBVar01474396
      WBVar01023514
      WBVar01023515
      WBVar01023516
      WBVar01023517
      WBVar01023518
      WBVar01023519
      WBVar01023520
      WBVar01023521
      WBVar01974043
      WBVar01023522
      WBVar01974044
      WBVar01023523
      WBVar01474223
      WBVar01023524
      WBVar01023525
      WBVar01023526
      WBVar01023527
      WBVar01023528
      WBVar01023529
      WBVar01023530
      WBVar01023531
      WBVar01499496
      WBVar01499316
      WBVar00462140
      WBVar00462141
      WBVar01500066
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP5144
    Ortholog: WBGene00038376 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00071822 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00148657 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00124561 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP26.g17890 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1927 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6602 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g7175 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g10816 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g22782 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g22939 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21476 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-C13F10.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15415 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02620.g27263 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09721 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017328 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50226900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g14626 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including cephalic sheath cell; ciliated neurons; germ line; pharyngeal cell; and rectal epithelial cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including dpy-10; hsf-1; and pgl-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including rotenone; manganese chloride; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Leucine-rich repeat domain superfamily. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C13F10.6
    Corresponding_CDS_history: C13F10.6a:wp264
      C13F10.6b:wp264
    Corresponding_transcript: C13F10.6.1
    Other_sequence: CBC15291_1
      CBC01008_1
    Associated_feature: WBsf652762
      WBsf233922
      WBsf233923
  Experimental_info: RNAi_result: WBRNAi00028849 Inferred_automatically: RNAi_primary
      WBRNAi00040451 Inferred_automatically: RNAi_primary
      WBRNAi00007803 Inferred_automatically: RNAi_primary
      WBRNAi00077814 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018476
      Expr1036737
      Expr1144517
      Expr2000749
      Expr2018968
    Drives_construct: WBCnstr00028601
    Construct_product: WBCnstr00028601
    Microarray_results (21)
    Expression_cluster (128)
    Interaction (87)
  Map_info: Positive: Positive_clone: C13F10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 0.634795
  Method: Gene