WormBase Tree Display for Gene: WBGene00008929

WBGene00008929 SMap: S_parent: Sequence: F18A11
  Identity: Version: 1
    Name: Sequence_name: F18A11.2
      Molecular_name: F18A11.2
        F18A11.2.1
        CE09452
        F18A11.2.2
        F18A11.2.3
        F18A11.2.4
      Other_name: CELE_F18A11.2 Accession_evidence: NDB BX284602
      Public_name: F18A11.2
    DB_info: Database: AceView gene 2N325
        WormQTL gene WBGene00008929
        WormFlux gene WBGene00008929
        NDB locus_tag CELE_F18A11.2
        Panther gene CAEEL|WormBase=WBGene00008929|UniProtKB=O01324
          family PTHR47159
        NCBI gene 174945
        RefSeq protein NM_064370.6
        TREEFAM TREEFAM_ID TF313988
        TrEMBL UniProtAcc O01324
        UniProt_GCRP UniProtAcc O01324
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01499702
      WBVar02151617
      WBVar01261373
      WBVar01261384
      WBVar01498802
      WBVar01498435
      WBVar02151081
      WBVar01560926
      WBVar01560927
      WBVar01560928
      WBVar01560929
      WBVar01560930
      WBVar01441262
      WBVar01560931
      WBVar02144299
      WBVar01498828
      WBVar01498829
      WBVar00257326
      WBVar01949661
      WBVar02130997
      WBVar01666872
      WBVar01846682
      WBVar00779513
      WBVar00779514
      WBVar00779515
      WBVar00779516
      WBVar00779517
      WBVar01720931
      WBVar00779518
      WBVar01917434
      WBVar00779519
      WBVar01720932
      WBVar01917435
      WBVar00779520
      WBVar01917436
      WBVar00779521
      WBVar00779522
      WBVar00297131
      WBVar00779523
      WBVar00779524
      WBVar00106539
      WBVar00779525
      WBVar00779526
      WBVar00779527
      WBVar00779528
      WBVar00779529
      WBVar01892614
      WBVar00779530
      WBVar00779531
      WBVar00779532
      WBVar00779533
      WBVar01249209
      WBVar00231154
      WBVar00779534
      WBVar01249210
      WBVar00779535
      WBVar00381854
      WBVar00779536
      WBVar00779537
      WBVar00381855
      WBVar02106541
      WBVar00381856
      WBVar00779538
      WBVar00779539
      WBVar00381857
      WBVar00381858
      WBVar00779540
      WBVar00381859
      WBVar00779541
      WBVar00381860
      WBVar00779542
      WBVar00779543
      WBVar00381861
      WBVar00779544
      WBVar00381862
      WBVar00381863
      WBVar00381864
      WBVar00381865
      WBVar00381866
      WBVar00003543
      WBVar00381867
      WBVar01960686
      WBVar00244283
      WBVar00003548
      WBVar00244284
      WBVar01792350
      WBVar00003553
      WBVar00003558
      WBVar01836710
      WBVar01380717
      WBVar00003563
      WBVar00003568
      WBVar01936421
      WBVar01936422
      WBVar00003573
      WBVar00231205
      WBVar01936423
      WBVar02052970
      WBVar00003578
      WBVar02094064
      WBVar00003583
      WBVar01784977
      WBVar01784978
      WBVar00312000
      WBVar01943948
      WBVar01498941
      WBVar01315740
      WBVar01505777
      WBVar01505778
      WBVar01539375
      WBVar01505779
      WBVar01539376
      WBVar01539377
      WBVar01539378
      WBVar01539379
      WBVar01685785
      WBVar01577113
    RNASeq_FPKM (74)
    Ortholog: WBGene00025782 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00053659 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00163527 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00191439 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g7190 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3262 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g11141 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15691 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12438 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g17817 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13111 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7085 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g14734 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g16349 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g5966 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g6261 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00140.g5410 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-F18A11.2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7861 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00874.g16338 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10495 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005249 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08692 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13457 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20320100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g6304 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00126953 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00283744 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00263967 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (11)
    Structured_description: Automated_description: Enriched in head mesodermal cell; hypodermis; seam cell; and tail precursor cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and rrf-3 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by eleven chemicals including Ethanol; mianserin; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: CRAL/TRIO domain; CRAL-TRIO lipid binding domain; and CRAL-TRIO lipid binding domain superfamily. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F18A11.2
    Corresponding_transcript: F18A11.2.1
      F18A11.2.2
      F18A11.2.3
      F18A11.2.4
    Other_sequence: CR09889
      Dviv_isotig14792
      CRC10832_1
      JI172835.1
    Associated_feature: WBsf644785
      WBsf990300
      WBsf990301
      WBsf990302
      WBsf1013551
      WBsf1013552
      WBsf222318
      WBsf222319
  Experimental_info: RNAi_result: WBRNAi00007301 Inferred_automatically: RNAi_primary
      WBRNAi00013487 Inferred_automatically: RNAi_primary
      WBRNAi00044916 Inferred_automatically: RNAi_primary
      WBRNAi00013488 Inferred_automatically: RNAi_primary
      WBRNAi00031090 Inferred_automatically: RNAi_primary
      WBRNAi00031089 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014544
      Expr1033888
      Expr1148885
      Expr2002703
      Expr2020919
    Drives_construct: WBCnstr00032585
    Construct_product: WBCnstr00032585
    Microarray_results (21)
    Expression_cluster (158)
    Interaction: WBInteraction000281854
      WBInteraction000287306
      WBInteraction000303958
      WBInteraction000343647
      WBInteraction000371409
      WBInteraction000383295
      WBInteraction000402284
      WBInteraction000445488
      WBInteraction000578758
      WBInteraction000584202
  Map_info: Positive: Positive_clone: F18A11 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 13.7706
  Reference: WBPaper00055090
  Method: Gene