WormBase Tree Display for Variation: WBVar00244284

WBVar00244284 Name: Public_name: WBVar00244284
    Other_name: snp_F18A11[2]
      haw135212
      cewivar00016698
      F18A11.2.3:c.1037+64T>A
      F18A11.2.1:c.1037+64T>A
      F18A11.2.4:c.1037+64T>A
      F18A11.2.2:c.1037+64T>A
    HGVSg: CHROMOSOME_II:g.13035532T>A
  Sequence_details: SMap: S_parent: Sequence: F18A11
    Flanking_sequences: tgtgtcagagtgtctcattttggtt gatctacgtagatctacaaaaaacg
    Mapping_target: F18A11
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000032 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004599 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: SNP_Wicks
          WGS_De_Bono
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00006631 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: WGS_De_Bono
          Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
      WBStrain00024204 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Person: WBPerson4037
    Analysis: SNP_Wicks
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01315737
        WBVar01380722
        WBVar00555077
    Status: Live
  Affects: Gene: WBGene00008929
    Transcript: F18A11.2.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18A11.2.2:c.1037+64T>A
        Intron_number: 6/7
      F18A11.2.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18A11.2.3:c.1037+64T>A
        Intron_number: 6/7
      F18A11.2.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18A11.2.1:c.1037+64T>A
        Intron_number: 5/6
      F18A11.2.4 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F18A11.2.4:c.1037+64T>A
        Intron_number: 5/6
  Reference: WBPaper00038208
    WBPaper00004703
    WBPaper00037807
  Remark: Predicted SNP: Psnp=0.8806 VarS=AT
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_F18A11.2
    [20040130 db] this Allele was previously named snp_F18A11.2
    [20090224 db] original Wicks name : F18A11:9537..10495@775 Psnp=0.8806 VarS=AT
    [20090224 db] original Wicks id : yy50c02.s1@120,a,39
    [20090224 db] Snip-SNP
  Method: SNP_Wicks