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WormBase Tree Display for Gene: WBGene00000288

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Name Class

WBGene00000288SMapS_parentSequenceCHROMOSOME_IV
IdentityVersion1
NameCGC_namecal-4Person_evidenceWBPerson261
Sequence_nameT07G12.1
Molecular_nameT07G12.1a
T07G12.1a.1
CE43875
T07G12.1b
CE43912
T07G12.1c
CE13387
T07G12.1b.1
T07G12.1b.2
T07G12.1c.1
Other_nameCELE_T07G12.1Accession_evidenceNDBBX284604
Public_namecal-4
DB_infoDatabaseAceViewgene4L293
WormQTLgeneWBGene00000288
WormFluxgeneWBGene00000288
NDBlocus_tagCELE_T07G12.1
PanthergeneCAEEL|WormBase=WBGene00000288|UniProtKB=G5EDZ8
familyPTHR23050
NCBIgene177945
RefSeqproteinNM_001392392.1
NM_001392393.1
NM_001268562.3
TREEFAMTREEFAM_IDTF354258
TrEMBLUniProtAccG5EF93
G5EDZ8
O18058
UniProt_GCRPUniProtAccG5EDZ8
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcal
AlleleWBVar00258184
WBVar01500079
WBVar01730724
WBVar01730725
WBVar01730726
WBVar01730727
WBVar01730728
WBVar01730729
WBVar01730730
WBVar01730731
WBVar01730732
WBVar01730733
WBVar01730734
WBVar00056890
WBVar01730735
WBVar01730736
WBVar01730737
WBVar01730738
WBVar01498996
WBVar01730739
WBVar01730740
WBVar02151092
WBVar02151093
WBVar01499925
WBVar00434225
WBVar00434226
WBVar00434227
WBVar00434228
WBVar00434229
WBVar00434230
WBVar00434231
WBVar00236568
WBVar00434232
WBVar00938187
WBVar00434233
WBVar00434234
WBVar00938188
WBVar00938189
WBVar00434235
WBVar00938190
WBVar00434236
WBVar00434237
WBVar00938191
WBVar00938192
WBVar00434238
WBVar00938193
WBVar00434239
WBVar00938194
WBVar00434240
WBVar00434241
WBVar02037105
WBVar00938195
WBVar00434242
WBVar02037106
WBVar00938196
WBVar02037107
WBVar00938197
WBVar00434243
WBVar02037108
WBVar00938198
WBVar02037109
WBVar00938199
WBVar00938200
WBVar00938201
WBVar00938202
WBVar00938203
WBVar00938204
WBVar00938205
WBVar00938206
WBVar01410554
WBVar00938207
WBVar00938208
WBVar00938209
WBVar00938210
WBVar00938211
WBVar00938212
WBVar00938213
WBVar00938214
WBVar00938215
WBVar00938216
WBVar00938217
WBVar00938218
WBVar00938219
WBVar00938220
WBVar01482306
WBVar00938221
WBVar02109091
WBVar00938222
WBVar00938223
WBVar00938224
WBVar00938225
WBVar00938226
WBVar00938227
WBVar00938228
WBVar00938229
WBVar00938230
WBVar01492436
WBVar00938231
WBVar00938232
WBVar00938233
WBVar02151892
WBVar02123091
WBVar00938234
WBVar00938235
WBVar00938236
WBVar00938237
WBVar00938238
WBVar01688111
WBVar00938239
WBVar00262156
WBVar02134562
WBVar00191805
WBVar00191806
WBVar02058710
WBVar02058711
WBVar02058712
WBVar02058713
WBVar01857080
WBVar01857081
WBVar01857082
WBVar01857083
WBVar01857084
WBVar01857085
WBVar01857086
WBVar01453971
WBVar01453972
WBVar01795359
WBVar01795360
WBVar01795361
WBVar02021149
WBVar00306864
WBVar02021150
WBVar02021151
WBVar02021152
WBVar02021153
WBVar02021154
WBVar02021155
WBVar01500245
WBVar01495282
RNASeq_FPKM (74)
GO_annotation00015097
00107176
OrthologWBGene00059184Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00073193Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00030154Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00164211Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00150004Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00120998Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00225920Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7950Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8944Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g17177Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21725Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7414Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5316Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g815Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9072Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19887Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14127Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00211.g7104Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cal-4Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17784Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00757.g15176Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18228Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_015002Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10407Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13346Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40075600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g11613Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240729Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00116759Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00265632Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285809Trichuris murisFrom_analysisWormBase-Compara
Paralog (18)
Structured_descriptionConcise_descriptioncal-4 encodes one of five predicted C. elegans calcium-binding calmodulin homologs (the others being CAL-1, CAL-2, CAL-3 and CMD-1); as loss of cal-4 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of CAL-4 in C. elegans development and/or behavior is not yet known.Paper_evidenceWBPaper00005654
Curator_confirmedWBPerson1843
Date_last_updated18 Oct 2006 00:00:00
Automated_descriptionPredicted to enable calcium ion binding activity.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST07G12.1a
T07G12.1b
T07G12.1c
Corresponding_transcriptT07G12.1a.1
T07G12.1b.1
T07G12.1b.2
T07G12.1c.1
Other_sequenceCR04779
CRC05558_1
Acan_isotig16535
GRC00610_1
Dviv_isotig15698
JI464431.1
ES567728.1
FG583640.1
ES566334.1
JI467444.1
TSC00258_1
ES272840.1
JI468664.1
SC01272
ES562464.1
ES562531.1
ACC27235_1
JI172765.1
EY463421.1
CR05296
MAC02095_1
TS01488
AW506490.1
ES564427.1
MA01125
GR977935.1
Dviv_isotig15699
JI465056.1
Associated_featureWBsf660585
WBsf660586
WBsf997639
WBsf997640
WBsf997641
WBsf997642
WBsf1018106
WBsf1018107
WBsf228999
Experimental_infoRNAi_resultWBRNAi00052782Inferred_automaticallyRNAi_primary
WBRNAi00035317Inferred_automaticallyRNAi_primary
WBRNAi00076661Inferred_automaticallyRNAi_primary
WBRNAi00018388Inferred_automaticallyRNAi_primary
Expr_patternExpr6632
Expr1011751
Expr1156389
Expr2009704
Expr2027943
Drives_constructWBCnstr00004019
WBCnstr00037602
Construct_productWBCnstr00037602
Microarray_results (22)
Expression_cluster (187)
Interaction (11)
Map_infoMapIVPosition4.61636Error0.000867
PositivePositive_cloneT07G12Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00019540
WBPaper00023932
WBPaper00030971
WBPaper00050050
RemarkSequence connection from [Schulze E, Karabinos A, Weber K], 02/06/11 krb
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene