WormBase Tree Display for Gene: WBGene00044324
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WBGene00044324 | SMap | S_parent | Sequence | ZK652 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | ufm-1 | Paper_evidence | WBPaper00042074 | |||||
Person_evidence | WBPerson1352 | ||||||||
Sequence_name | ZK652.3 | ||||||||
Molecular_name | ZK652.3 | ||||||||
ZK652.3.1 | |||||||||
CE00449 | |||||||||
Other_name | tag-277 | ||||||||
3H949 | Paper_evidence | ||||||||
Accession_evidence | EMBL | AF303260 | |||||||
CELE_ZK652.3 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | ufm-1 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 22 Apr 2005 11:55:18 | WBPerson2970 | Event | Created | |||
2 | 24 Jul 2006 13:03:18 | WBPerson2970 | Event | Acquires_merge | WBGene00022784 | ||||
3 | 15 Mar 2013 16:30:53 | WBPerson2970 | Name_change | CGC_name | ufm-1 | ||||
Other_name | tag-277 | ||||||||
Acquires_merge | WBGene00022784 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ufm | ||||||||
Allele | WBVar01500260 | ||||||||
WBVar01499774 | |||||||||
WBVar00145785 | |||||||||
WBVar00402313 | |||||||||
WBVar00402314 | |||||||||
WBVar00841428 | |||||||||
WBVar00841429 | |||||||||
WBVar02125641 | |||||||||
WBVar00841430 | |||||||||
WBVar02125642 | |||||||||
WBVar00841431 | |||||||||
WBVar02125643 | |||||||||
WBVar00841432 | |||||||||
WBVar00841433 | |||||||||
WBVar00841434 | |||||||||
Strain | WBStrain00003130 | ||||||||
WBStrain00036176 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00043824 | ||||||||
00043825 | |||||||||
00146031 | |||||||||
Contained_in_operon | CEOP3460 | ||||||||
Ortholog (33) | |||||||||
Structured_description | Concise_description | ufm-1 encodes a conserved ubiquitin-like post-translational modifier. | Paper_evidence | WBPaper00005435 | |||||
WBPaper00044965 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 02 May 2014 00:00:00 | ||||||||
Automated_description | Predicted to be involved in protein ufmylation. Predicted to be located in cytoplasm and nucleus. Expressed in egg-laying apparatus; hermaphrodite gonad; intestine; and seam cell. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy 14. Is an ortholog of human UFM1 (ubiquitin fold modifier 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0080296 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20597) | ||||
Molecular_info | Corresponding_CDS | ZK652.3 | |||||||
Corresponding_transcript | ZK652.3.1 | ||||||||
Other_sequence (80) | |||||||||
Associated_feature | WBsf645363 | ||||||||
WBsf225286 | |||||||||
WBsf225287 | |||||||||
Experimental_info | RNAi_result (16) | ||||||||
Expr_pattern | Chronogram1949 | ||||||||
Expr7240 | |||||||||
Expr10622 | |||||||||
Expr1021446 | |||||||||
Expr1040227 | |||||||||
Expr1163022 | |||||||||
Expr2017751 | |||||||||
Expr2035890 | |||||||||
Drives_construct | WBCnstr00003613 | ||||||||
WBCnstr00003614 | |||||||||
WBCnstr00017401 | |||||||||
WBCnstr00037812 | |||||||||
Construct_product | WBCnstr00037812 | ||||||||
Microarray_results | SMD_ZK652.3 | ||||||||
176124_at | |||||||||
A_12_P100884 | |||||||||
Aff_ZK652.3 | |||||||||
GPL13394_WBGene00044324 | |||||||||
GPL13914_ZK652.3 | |||||||||
GPL14144_ZK652.3_132-191_0.941_1_A | |||||||||
GPL14144_ZK652.3_196-255_0.912_5_C | |||||||||
GPL14144_ZK652.3_20-79_0.917_3_B | |||||||||
GPL19516_CGZ0057319 | |||||||||
GPL19516_CGZ0057320 | |||||||||
GPL21109_ZK652.3.1 | |||||||||
GPL3518_CE00449 | |||||||||
GPL8304_CE_WBGene00044324_A | |||||||||
GPL8304_CE_WBGene00044324_B | |||||||||
GPL8673_ZK652_3P00014 | |||||||||
GPL8673_ZK652_3P00139 | |||||||||
GPL8673_ZK652_3P00166 | |||||||||
GPL9450_ZK652.3 | |||||||||
cea2.c.25516 | |||||||||
Expression_cluster (126) | |||||||||
Interaction (22) | |||||||||
Map_info | Map | III | Position | -0.542001 | Error | 0.000839 | |||
Positive | Positive_clone | ZK652 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005435 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00044965 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |