WormBase Tree Display for Gene: WBGene00014965

WBGene00014965 SMap: S_parent: Sequence: Y106G6D
  Identity: Version: 2
    Name: Sequence_name: Y106G6D.5
      Molecular_name: Y106G6D.5a
        Y106G6D.5a.1
        CE50264
        Y106G6D.5b
        CE50220
        Y106G6D.5b.1
        Y106G6D.5c
        Y106G6D.5d
      Other_name: CELE_Y106G6D.5 Accession_evidence: NDB BX284601
      Public_name: Y106G6D.5
    DB_info: Database (9)
    Species: Caenorhabditis elegans
    History: Version_change: 1 27 May 2004 15:23:24 WBPerson1971 Event: Imported: Initial conversion from Pseudogene class of WS125
        2 18 Sep 2014 13:15:09 WBPerson1983 Event: Changed_class: Pseudogene CDS
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01499739
      WBVar01496614
      WBVar00343362
      WBVar00343363
      WBVar00343364
      WBVar00343365
      WBVar00343366
      WBVar00343367
      WBVar00343368
      WBVar00343369
      WBVar00343370
      WBVar01499786
      WBVar01499054
      WBVar00267209
      WBVar00267210
      WBVar00664954
      WBVar00664955
      WBVar00664956
      WBVar00664957
      WBVar00664958
      WBVar00664959
      WBVar00664960
      WBVar00664961
      WBVar00664962
      WBVar00664963
      WBVar00664964
      WBVar00664965
      WBVar00664966
      WBVar00664967
      WBVar00664968
      WBVar00664969
      WBVar00664970
      WBVar00664971
      WBVar00664972
      WBVar00664973
      WBVar00664974
      WBVar00664975
      WBVar00664976
      WBVar00664977
      WBVar00664978
      WBVar00664979
      WBVar00664980
      WBVar00664981
      WBVar00664982
      WBVar02128324
      WBVar01498959
    RNASeq_FPKM (74)
    GO_annotation: 00000560
      00000561
      00000562
      00000563
      00000564
      00000565
      00000566
      00000567
      00120999
    Ortholog (36)
    Paralog: WBGene00001016 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001258 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004880 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007329 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008099 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010989 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00014208 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016565 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016566 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA binding activity and transcription termination site sequence-specific DNA binding activity. Predicted to be involved in termination of RNA polymerase II transcription. Predicted to be located in nuclear body. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease axonal type 2S and distal spinal muscular atrophy 1. Is an ortholog of human IGHMBP2 (immunoglobulin mu DNA binding protein 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0111064 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5542)
      DOID:0110171 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5542)
  Molecular_info: Corresponding_CDS: Y106G6D.5a
      Y106G6D.5b
    Corresponding_CDS_history: Y106G6D.5:wp101
    Corresponding_transcript: Y106G6D.5c
      Y106G6D.5d
      Y106G6D.5a.1
      Y106G6D.5b.1
    Corresponding_pseudogene_history: Y106G6D.5a:wp245
      Y106G6D.5b:wp245
    Other_sequence (29)
    Associated_feature: WBsf649549
      WBsf649550
      WBsf664838
      WBsf984918
      WBsf1010490
  Experimental_info: RNAi_result: WBRNAi00117028 Inferred_automatically: RNAi_primary
      WBRNAi00055254 Inferred_automatically: RNAi_primary
      WBRNAi00002235 Inferred_automatically: RNAi_primary
      WBRNAi00004497 Inferred_automatically: RNAi_primary
      WBRNAi00004496 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2006987
      Expr2025209
    Microarray_results: SMD_Y106G6D.5
      SMD_Y106G6D.6
      185091_at
      185498_at
      A_12_P155945
      A_12_P155946
      Aff_Y106G6D.5
      Aff_Y106G6D.6
      GPL19516_CGZ0041961
      GPL19516_CGZ0041962
      GPL21109_Y106G6D.5a
      GPL3518_CE19303
      GPL9450_Y106G6D.5
      cea2.p.25135
    Expression_cluster (76)
  Map_info: Positive: Positive_clone: Y106G6D Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 4.65979
  Reference: WBPaper00055090
    WBPaper00064339
  Method: Gene