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WormBase Tree Display for Gene: WBGene00003850

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Name Class

WBGene00003850SMapS_parentSequenceC34D1
IdentityVersion1
NameCGC_nameodr-3Person_evidenceWBPerson42
Sequence_nameC34D1.3
Molecular_nameC34D1.3
C34D1.3.1
CE08571
Other_nameCELE_C34D1.3Accession_evidenceNDBBX284605
Public_nameodr-3
DB_infoDatabaseAceViewgene5N728
WormQTLgeneWBGene00003850
WormFluxgeneWBGene00003850
NDBlocus_tagCELE_C34D1.3
PanthergeneCAEEL|WormBase=WBGene00003850|UniProtKB=Q18434
familyPTHR10218
NCBIgene179806
RefSeqproteinNM_073889.3
SwissProtUniProtAccQ18434
UniProt_GCRPUniProtAccQ18434
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classodr
AlleleWBVar00090361Inferred_automaticallyFrom strain object: CX2205
WBVar00090219Inferred_automaticallyFrom strain object: CX3222
From strain object: NL2105
WBVar00090344Inferred_automaticallyFrom strain object: MT4810
WBVar00239272
WBVar02148587
WBVar02158919
WBVar00263146
WBVar00263147
WBVar02137389
WBVar00474483
WBVar01869276
WBVar00474484
WBVar01975219
WBVar01869277
WBVar00474485
WBVar01869278
WBVar01869279
WBVar00474486
WBVar01869280
WBVar01869281
WBVar01869282
WBVar01869283
WBVar01869284
WBVar01462426
WBVar01498809
WBVar01462427
WBVar02061748
WBVar02061749
WBVar01703184
WBVar01499621
WBVar01491348
WBVar01743890
WBVar01743891
WBVar01060159
WBVar01060160
WBVar01060161
WBVar01060162
WBVar01060163
WBVar01060164
WBVar01060165
WBVar01060166
WBVar01060167
WBVar01060168
WBVar01060169
WBVar01500212
WBVar01060170
WBVar01500213
WBVar01060171
WBVar01060172
WBVar01060173
WBVar01060174
WBVar01499299
WBVar02115598
WBVar00012200
WBVar02043678
WBVar01499316
Legacy_information[Bargmann CI] defective chemotaxis to volatile odorants; osmotic avoidance defective
[C.elegansII] n2150 : reduced response to all volatile odorants; defective osmotic avoidance; some chemotactic defects. Cilia of sensory neuron AWC stunted. OA1: n2046 (weaker phenotypes). [Bargmann et al. 1993]
StrainWBStrain00027155
WBStrain00028996
WBStrain00005221
WBStrain00005238
RNASeq_FPKM (74)
GO_annotation (33)
Ortholog (46)
Paralog (21)
Structured_descriptionConcise_descriptionodr-3 encodes a G protein alpha subunit; odr-3 activity is required for normal chemotaxis, odorant avoidance, and nociceptive function as well as cilium morphogenesis in chemosensory neurons; an ODR-3::GFP is expressed in five pairs of sensory neurons AWA, AWB, AWC, ASH, and ADF; the AWC neurons consistently express GFP most strongly, while the AWB neurons express at lower levels and the AWA, ASH, and ADF neurons express only weakly; in AWC neurons, ODR-3::GFP localizes to cilia which have a characteristic wing-shaped morphology.Paper_evidenceWBPaper00002996
WBPaper00024365
Curator_confirmedWBPerson1843
Date_last_updated05 Nov 2007 00:00:00
Automated_descriptionEnables olfactory receptor binding activity. Involved in several processes, including hyperosmotic response; olfactory behavior; and response to odorant. Located in neuronal cell body and non-motile cilium. Expressed in amphid neurons.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC34D1.3
Corresponding_transcriptC34D1.3.1
Other_sequence (15)
Associated_featureWBsf1001774
WBsf1001775
WBsf1001776
WBsf1001777
WBsf1001778
WBsf1020690
WBsf1020691
WBsf1020692
WBsf234783
Experimental_infoRNAi_resultWBRNAi00029513Inferred_automaticallyRNAi_primary
WBRNAi00011587Inferred_automaticallyRNAi_primary
WBRNAi00041860Inferred_automaticallyRNAi_primary
Expr_pattern (13)
Drives_construct (83)
Construct_productWBCnstr00005410
WBCnstr00013107
WBCnstr00018501
WBCnstr00035830
AntibodyWBAntibody00000161
WBAntibody00000774
WBAntibody00001128
Microarray_results (18)
Expression_cluster (121)
InteractionWBInteraction000004934
WBInteraction000009054
WBInteraction000029805
WBInteraction000032672
WBInteraction000032674
WBInteraction000032675
WBInteraction000033048
WBInteraction000033621
WBInteraction000034000
WBInteraction000034049
WBInteraction000034470
WBInteraction000034473
WBInteraction000036883
WBInteraction000037419
WBInteraction000037642
WBInteraction000038300
WBInteraction000038302
WBInteraction000038643
WBInteraction000039852
WBInteraction000039918
WBInteraction000040471
WBInteraction000040888
WBInteraction000043005
WBInteraction000043231
WBInteraction000043393
WBInteraction000044276
WBInteraction000045109
WBInteraction000045491
WBInteraction000045769
WBInteraction000047351
WBInteraction000049690
WBInteraction000049755
WBInteraction000049925
WBInteraction000050422
WBInteraction000111071
WBInteraction000126390
WBInteraction000126886
WBInteraction000142057
WBInteraction000142058
WBInteraction000142059
WBInteraction000145274
WBInteraction000149170
WBInteraction000161324
WBInteraction000161325
WBInteraction000172101
WBInteraction000179635
WBInteraction000179636
WBInteraction000202360
WBInteraction000202365
WBInteraction000207609
WBInteraction000212962
WBInteraction000212963
WBInteraction000218495
WBInteraction000218496
WBInteraction000223563
WBInteraction000233812
WBInteraction000234554
WBInteraction000465039
WBInteraction000471531
WBInteraction000475062
WBInteraction000500835
WBInteraction000501711
WBInteraction000502422
WBInteraction000502424
WBInteraction000502744
WBInteraction000504894
WBInteraction000521278
WBInteraction000555690
Anatomy_functionWBbtf0003
WBbtf0004
WBbtf1023
WBbtf1024
Map_infoMapVPosition4.99556Error0.01206
Well_ordered
PositivePositive_cloneC34D1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point2052
2053
2054
4713
5548
Reference (150)
MethodGene