WormBase Tree Display for Gene: WBGene00043952

WBGene00043952 SMap: S_parent: Sequence: ZC404
  Identity: Version: 2
    Name: Sequence_name: ZC404.2
      Molecular_name: ZC404.2
        ZC404.2.1
        CE45229
      Other_name: CELE_ZC404.2 Accession_evidence: NDB BX284605
      Public_name: ZC404.2
    DB_info: Database: WormFlux gene WBGene00043952
        NDB locus_tag CELE_ZC404.2
        NCBI gene 13213394
        RefSeq protein NM_001269142.2
        TrEMBL UniProtAcc E0AHA6
        UniProt_GCRP UniProtAcc E0AHA6
    Species: Caenorhabditis elegans
    History: Version_change: 1 04 Oct 2004 10:58:10 WBPerson1971 Event: Created
                Killed
        2 09 Jul 2010 09:12:03 WBPerson1849 Event: Resurrected
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01500265
      WBVar01500266
      WBVar01499173
      WBVar01499174
      WBVar00461264
      WBVar01499740
      WBVar01500129
      WBVar01499056
      WBVar00586994
      WBVar01499679
      WBVar01499496
      WBVar01499316
      WBVar01020612
      WBVar01020613
      WBVar01020614
      WBVar01500066
    RNASeq_FPKM (74)
    GO_annotation: 00007943
    Ortholog: chrV_pilon.g14517 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZC404.2
    Corresponding_CDS_history: ZC404.2:wp88
    Corresponding_transcript: ZC404.2.1
    Associated_feature: WBsf661050
  Experimental_info: RNAi_result: WBRNAi00021674 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1162322
      Expr2008620
      Expr2026855
    Microarray_results: SMD_ZC404.2
      180445_at
      GPL19516_CGZ0055810
      GPL21109_ZC404.2
    Expression_cluster: WBPaper00045521:Spermatogenic
      WBPaper00046805:P-granule-RNAi_upregulated_Set1
      WBPaper00048611:MnCl2_downregulated
      WBPaper00049545:cco-1(RNAi)_downregulated
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050231:male_enriched
      WBPaper00053289:DREAM-target
      WBPaper00053318:Aging_downregulated_mRNA_N2
      WBPaper00053318:mir-71(n4115)_downregulated_mRNA
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00054872:egl-9(sa307)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056290:hsp-6(mg585)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00057041:spc-1(cas971)_upregulated
      WBPaper00057140:pptr-1(tm3103)_downregulated
      WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_downregulated_endo-siRNA_targets
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_upregulated_L4
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00061340:rect_D
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061527:C01G10.14-dct-9_3227
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064107:lin-35(n745)_upregulated
      WBPaper00064505:tamoxifen_downregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00066110:Cisplatin_upregulated_diploid
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_10
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045263:isp-1(qm150)_downregulated
      WBPaper00045263:nuo-6(qm200)_downregulated
      WBPaper00045263:ProLongevity-mtROS_downregulated
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
      [cgc6390]:Cluster_F
      [cgc6390]:intrinsic
  Map_info: Positive: Positive_clone: ZC404 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 0.271226
  Remark: The corresponding CDS object for this gene had been created and removed before WormBase introduced the concept of unique gene identifiers. This (dead) gene object exists as an attempt to make sure that a gene ID exists for every worm gene prediction that has ever existed. Curator_confirmed: WBPerson1971
  Method: Gene