WormBase Tree Display for Gene: WBGene00022018

WBGene00022018 SMap: S_parent: Sequence: Y61A9LA
  Identity: Version: 1
    Name: Sequence_name: Y61A9LA.7
      Molecular_name: Y61A9LA.7a
        Y61A9LA.7a.1
        CE50378
        Y61A9LA.7b
        CE50435
        Y61A9LA.7b.1
      Other_name: Y61A9LA.f Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y61A9LA.7 Accession_evidence: NDB BX284605
      Public_name: Y61A9LA.7
    DB_info: Database: AceView gene 5F38
        WormQTL gene WBGene00022018
        WormFlux gene WBGene00022018
        NDB locus_tag CELE_Y61A9LA.7
        NCBI gene 190446
        RefSeq protein NM_001313353.4
            NM_001313354.4
        TrEMBL UniProtAcc A0A0K3AW52
            A0A0K3ASI8
        UniProt_GCRP UniProtAcc A0A0K3ASI8
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01997594
      WBVar01499528
      WBVar01499740
      WBVar01483931
      WBVar01500129
      WBVar01650616
      WBVar01650617
      WBVar01650618
      WBVar01650619
      WBVar01739801
      WBVar01650620
      WBVar01650621
      WBVar01006349
      WBVar01006350
      WBVar01006351
      WBVar01006352
      WBVar01006353
      WBVar01006354
      WBVar01006355
      WBVar01973089
      WBVar02023526
      WBVar00208345
      WBVar00456413
      WBVar00456414
      WBVar00456415
      WBVar01499496
      WBVar01861154
      WBVar01861155
      WBVar01499316
      WBVar01500066
    RNASeq_FPKM (74)
    Ortholog (21)
    Structured_description: Automated_description: Enriched in several structures, including RIM; anterior arcade cell; coelomocyte; head mesodermal cell; and pharyngeal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and hsf-1 based on RNA-seq and microarray studies. Is affected by nine chemicals including mianserin; Alovudine; and Psoralens based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y61A9LA.7a
      Y61A9LA.7b
    Corresponding_CDS_history: Y61A9LA.7:wp246
    Corresponding_transcript: Y61A9LA.7a.1
      Y61A9LA.7b.1
    Associated_feature: WBsf652580
      WBsf652581
      WBsf668907
      WBsf233590
  Experimental_info: RNAi_result: WBRNAi00057830 Inferred_automatically: RNAi_primary
      WBRNAi00021205 Inferred_automatically: RNAi_primary
      WBRNAi00037661 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012615
      Expr1161267
      Expr2008130
      Expr2026369
    Microarray_results (23)
    Expression_cluster: WBPaper00037950:coelomocytes_embryo_enriched
      WBPaper00037950:coelomocytes_embryo_SelectivelyEnriched
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045774:clk-1_downregulated
      WBPaper00045861:wdr-5(ok1417)_downregulated
      WBPaper00048926:miaserin_upregulated_adult-day5
      WBPaper00050370:dpy-21(e428)_L3_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00053302:alovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053402:cco-1(RNAi)_downregulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00054493:hpl-2(tm1489)_upregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055013:spt-16(RNAi)_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200)_downregulated
      WBPaper00056169:rrf-3(pk1426)_downregulated_adult
      WBPaper00056169:rrf-3(pk1426)_downregulated_L3
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056169:rrf-3(pk1426)_upregulated_L2
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056826:hmc_biased
      WBPaper00057140:pptr-1(tm3103)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059231:alh-6(lax105)_L4_upregulated
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(et18)_downregulated
      WBPaper00061274:hypergravity_10xg_upregulated
      WBPaper00061340:Anterior_arcade_cell
      WBPaper00061340:Coelomocyte
      WBPaper00061340:g1A_g1P
      WBPaper00061340:g1A_parent
      WBPaper00061340:mc1
      WBPaper00061340:mc2
      WBPaper00061340:mc3
      WBPaper00061340:Parent_of_g1P_I3
      WBPaper00061340:Pharyngeal_marginal_cell
      WBPaper00061340:pm3_pm4_pm5
      WBPaper00061340:pm6
      WBPaper00061340:pm7
      WBPaper00061340:pm8
      WBPaper00061340:RIM
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:col-128-cdh-10_9234
      WBPaper00061651:Coelomocyte_enriched
      WBPaper00062118:neural-HSF-1_downregulated
      WBPaper00062156:jmjd-1.2(zr1010)_upregulated
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062534:fat-P-80_downregulated
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00064158:xpo-1(RNAi)_upregulated
      WBPaper00064539:nhr-114(gk849)_downregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065841:12_0
      WBPaper00065841:23_0
      WBPaper00065841:110_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00032948:FedUp
      WBPaper00034739:N2lessDR1350
      WBPaper00035084:embryo_enriched_AIN-2_IP
      WBPaper00035084:L2_enriched_AIN-2_IP
      WBPaper00035084:L3_enriched_AIN-2_IP
      WBPaper00035084:L4_enriched_AIN-2_IP
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_G
      WBPaper00038172:crh-1null_down_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00046083:oga-1(ok1207)_OP50_downregulated
      WBPaper00046083:ogt-1(ok1474)_OP50_downregulated
      WBPaper00046083:pmk-1(km25)_OP50_downregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00047070:N2_UV_downregulated
      WBPaper00047070:xpa-1_UV_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00055899:nitroguanidine_regulated
      [cgc6390]:Cluster_B
  Map_info: Positive: Positive_clone: Y61A9LA Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V -5.01746
  Method: Gene