WormBase Tree Display for Gene: WBGene00018851

WBGene00018851 SMap: S_parent: Sequence: F55A3
  Identity: Version: 1
    Name: Sequence_name: F55A3.6
      Molecular_name: F55A3.6
        F55A3.6.1
        CE54433
      Other_name: CELE_F55A3.6 Accession_evidence: NDB BX284601
      Public_name: F55A3.6
    DB_info: Database: AceView gene 1L362
        WormQTL gene WBGene00018851
        WormFlux gene WBGene00018851
        NDB locus_tag CELE_F55A3.6
        NCBI gene 186271
        RefSeq protein NM_060418.6
        TrEMBL UniProtAcc A0A8S4QCB1
        UniProt_GCRP UniProtAcc A0A8S4QCB1
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00668708
      WBVar00668709
      WBVar00668710
      WBVar00668711
      WBVar00668712
      WBVar00668713
      WBVar01432862
      WBVar01432863
      WBVar01499739
      WBVar01490394
      WBVar02128427
      WBVar01499054
      WBVar01498959
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP1915
    Structured_description: Automated_description: Enriched in coelomocyte; germ line; head mesodermal cell; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including glp-1; let-60; and eat-2 based on microarray; RNA-seq; and tiling array studies. Is affected by Alovudine; allantoin; and Sirolimus based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F55A3.6
    Corresponding_CDS_history: F55A3.6:wp221
      F55A3.6:wp282
    Corresponding_transcript: F55A3.6.1
    Associated_feature: WBsf664890
      WBsf985094
  Experimental_info: RNAi_result: WBRNAi00065640 Inferred_automatically: RNAi_primary
      WBRNAi00003782 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027994
      Expr1152218
      Expr2004202
      Expr2022422
    Microarray_results: SMD_F55A3.6
      191974_at
      Aff_F55A3.6
      GPL19516_CGZ0024014
      GPL21109_F55A3.6
      GPL8673_F55A3_6P00143
    Expression_cluster: WBPaper00037950:coelomocytes_CoreEnriched
      WBPaper00037950:coelomocytes_embryo_enriched
      WBPaper00037950:coelomocytes_embryo_SelectivelyEnriched
      WBPaper00037950:coelomocytes_larva_enriched
      WBPaper00037950:coelomocytes_larva_SelectivelyEnriched
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
      WBPaper00042561:smg-2(RNAi)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00045774:clk-1_upregulated
      WBPaper00046805:csr-1(RNAi)_downregulated_Set1
      WBPaper00048923:Aging_regulated
      WBPaper00049098:hrde-1(tm1200)-induced_15C
      WBPaper00049098:hrde-1(tm1200)-induced_23C
      WBPaper00050094:glp-1(gf)_upregulated
      WBPaper00050094:mes-2(bn11)_upregulated
      WBPaper00050094:mes-6(bn66)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00051265:F1_hrde-1(tm1200)_upregulated
      WBPaper00052885:hrde-1(tm1200)-emb-4(qm31)_regulated
      WBPaper00053302:alovudine_72h_regulated
      WBPaper00053321:lin-15B(RNAi)_upregulated_starved-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_starved-L1_Truseq
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00055941:nuo-6(qm200)_upregulated
      WBPaper00056284:ints-5(RNAi)_upregulated
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00059117:B.subtilis_downregulated
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00060014:set-2(zr2012)_upregulated
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060526:plp-1(ok2155)_upregulated
      WBPaper00061340:hmc
      WBPaper00061340:hmc_homolog
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:hrde-1(tm1200)_upregulated
      WBPaper00061527:Y40H4A.2-ZK1053.2
      WBPaper00061995:mter-4(syb3662syb3403)_upregulated
      WBPaper00062056:lin-15B(n744)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064509:static-magnetic-field_downregulated
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_25
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:hlh_1_enriched
      WBPaper00041267:SpaceFlight_Upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00048989:eat-2(ad465)_downregulated_in-DMSO
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      [cgc5376]:let-60(G12V)-regulated_genes
    Interaction (29)
  Map_info: Positive: Positive_clone: F55A3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 5.14083
  Reference: WBPaper00038491
  Method: Gene