WormBase Tree Display for Gene: WBGene00015879

WBGene00015879 SMap: S_parent: Sequence: C17B7
  Identity: Version: 1
    Name (4)
    DB_info: Database: AceView gene 5D817
        WormQTL gene WBGene00015879
        WormFlux gene WBGene00015879
        NDB locus_tag CELE_C17B7.5
        Panther gene CAEEL|WormBase=WBGene00015879|UniProtKB=O45155
          family PTHR12143
        NCBI gene 178766
        RefSeq protein NM_001322507.2
        TREEFAM TREEFAM_ID TF322613
        TrEMBL UniProtAcc O45155
        UniProt_GCRP UniProtAcc O45155
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01586523
      WBVar01586524
      WBVar01586525
      WBVar01586526
      WBVar01586527
      WBVar01499528
      WBVar01499167
      WBVar00998185
      WBVar00998186
      WBVar00998187
      WBVar00998188
      WBVar02122647
      WBVar00998189
      WBVar00998190
      WBVar00998191
      WBVar00998192
      WBVar00998193
      WBVar02122468
      WBVar00998194
      WBVar00998195
      WBVar00998196
      WBVar02124496
      WBVar00998197
      WBVar00998198
      WBVar00998199
      WBVar00998200
      WBVar00998201
      WBVar00998202
      WBVar00998203
      WBVar00998204
      WBVar01499740
      WBVar02122848
      WBVar00998205
      WBVar00998206
      WBVar00998207
      WBVar00998208
      WBVar00998209
      WBVar00998210
      WBVar00091114
      WBVar00998211
      WBVar00998212
      WBVar00998213
      WBVar00998214
      WBVar00998215
      WBVar02079233
      WBVar00998216
      WBVar02079234
      WBVar00998217
      WBVar00998218
      WBVar00998219
      WBVar00998220
      WBVar00998221
      WBVar00998222
      WBVar00998223
      WBVar00998224
      WBVar01500129
      WBVar00998225
      WBVar00998226
      WBVar00998227
      WBVar00998228
      WBVar00998229
      WBVar00998230
      WBVar00998231
      WBVar00998232
      WBVar00998233
      WBVar00998234
      WBVar00998235
      WBVar00998236
      WBVar00998237
      WBVar00998238
      WBVar00998239
      WBVar02120858
      WBVar02076087
      WBVar00256604
      WBVar02076474
      WBVar02076475
      WBVar02076476
      WBVar00453783
      WBVar00453784
      WBVar00453785
      WBVar00453786
      WBVar02121254
      WBVar00453787
      WBVar00453788
      WBVar00453789
      WBVar00453790
      WBVar02136038
      WBVar02122019
      WBVar02124043
      WBVar02121469
      WBVar02122396
      WBVar01499107
      WBVar02078588
      WBVar02124617
      WBVar02077102
      WBVar02077103
      WBVar02077104
      WBVar02077105
      WBVar02077106
      WBVar01498943
      WBVar01498944
      WBVar01499496
      WBVar00091234
      WBVar01499316
      WBVar00206148
      WBVar01586521
      WBVar01500066
      WBVar01586522
    RNASeq_FPKM (74)
    GO_annotation: 00033950
      00033951
      00033952
      00033953
      00033954
      00033955
      00121613
      00121614
    Ortholog (12)
    Paralog (19)
    Structured_description: Automated_description: Predicted to enable peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity. Predicted to be involved in glycoprotein catabolic process and protein quality control for misfolded or incompletely synthesized proteins. Predicted to be located in cytosol and nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C17B7.5
    Corresponding_CDS_history: C17B7.5:wp252
    Corresponding_transcript: C17B7.5.1
  Experimental_info: RNAi_result: WBRNAi00010893 Inferred_automatically: RNAi_primary
      WBRNAi00040766 Inferred_automatically: RNAi_primary
      WBRNAi00010892 Inferred_automatically: RNAi_primary
      WBRNAi00028988 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012388
      Expr1144806
      Expr2000891
      Expr2019111
    Drives_construct: WBCnstr00028489
    Construct_product: WBCnstr00028489
    Microarray_results (18)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00035211:age-1_vs_age-1_downregulated
      WBPaper00035211:age-1_vs_N2_downregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:hypodermis_larva_enriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00040209:B.thuringiensis_downregulated_MY15
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00044260:1-methylnicotinamide_upregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045017:blmp-1(tm548)_upregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045618:fbf-1_upregulated
      WBPaper00047132:glp-1(ts)-25C_upregulated
      WBPaper00048611:MnCl2_upregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049368:daf-2(e1370)_downregulated
      WBPaper00049498:npr-1(ur89)_regulated_1
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00049635:dop-1(vs100)_downregulated
      WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
      WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050015:ifg-1(RNAi)_upregulated
      WBPaper00050370:dpy-21(e428)_L3_downregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050743:elli-1(sam-3)_upregulated
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050801:SET-4_dauer_regulome
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00051404:alg-5(ram2)_downregulated
      WBPaper00051558:fog-2(q71)_regulated
      WBPaper00053295:lin-22(icb38)_upregulated
      WBPaper00053295:lin-22(ot267)_upregulated
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00053402:cco-1(RNAi)_upregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00053909:N2_vs_CB4856_upregulated
      WBPaper00054410:set-26(tm2467)_upregulated
      WBPaper00054872:egl-9(sa307)_downregulated
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055013:hmg-4(RNAi)_upregulated
      WBPaper00055013:spt-16(RNAi)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Psora_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00055941:nuo-6(qm200)_upregulated
      WBPaper00056039:efa-6(tm3124)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056167:Cry5B_downregulated
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056443:DietaryRestriction_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
      WBPaper00057158:mdt-15(tm2182)_dependent_15C_downregulated
      WBPaper00058711:wdr-5(ok1417)_upregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00058948:PA14_upregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059191:hsp-16.2p-LIN-29_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059735:glucose_downregulated_N2
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_downregulated_L4
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060909:atfs-1(et18)_upregulated
      WBPaper00060921:cat-2(e1112)_downregulated
      WBPaper00060921:tdc-1(n3419)_downregulated
      WBPaper00061081:E.faecalis_downregulated_N2
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061527:172183_at-176110_at
      WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
      WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
      WBPaper00061853:osm-3(dh441)_downregulated
      WBPaper00061853:osm-3(dh441)_downregulated_tunicamycin
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062347:blmp-1(tm548)_upregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00062715:blmp-1(s71)_upregulated
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064156:lipl-4(overexpress)_upregulated
      WBPaper00064494:postdauer_upregulated_WholeAnimal
      WBPaper00064532:pals-25(icb98)_downregulated
      WBPaper00064539:nhr-114(gk849)_upregulated
      WBPaper00064728:cpl-1(W32AY35A)_upregulated
      WBPaper00064769:him-17(me24)_upregulated
      WBPaper00065029:cadmium_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065288:mdt-15(tm2182)_upregulated
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065841:0_0
      WBPaper00065841:102_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066005:RAGA-1_degradation_neuronal_downregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066118:cyclobutrifluram_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      WBPaper00066204:CdCl2_upregulated_mRNA
      cgc4489_group_17
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026952:class_B
      WBPaper00030985:Photorhabdus_luminescens_downregulated
      WBPaper00035227:heat_shock_regulated
      WBPaper00036286:Pattern_D
      WBPaper00036464:S.aureus-RN6390_regulated
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045015:nhr-25(RNAi)_downregulated
      WBPaper00046548:dafachronic-acid_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      [cgc6390]:male_soma-enriched
    Interaction: WBInteraction000214171
      WBInteraction000311081
      WBInteraction000448672
  Map_info: Positive: Positive_clone: C17B7 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V -12.1331
  Method: Gene